Return to main results Retrieve Phyre Job Id

Job DescriptionP21179
Confidence50.58%DateThu Jan 5 11:38:00 GMT 2012
Rank120Aligned Residues95
% Identity12%Templatec2obxH_
PDB info PDB header:transferaseChain: H: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1; PDBTitle: lumazine synthase ribh2 from mesorhizobium loti (gene mll7281, swiss-2 prot entry q986n2) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   599600......... 610.........620.........630.........640.........650.........660.........670
Predicted Secondary structure 



...



























.....
Query SS confidence 










. . .




























































. . . . .
Query Sequence  KGRVVAILLND. . . EVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG. . . . .
Query Conservation   







 
...
 
      
  

 
 

 
 


   
 
 
  
  
 

 
  
  

 








.....
Alig confidence 










...



























..


















...








.....
Template Conservation     




 
  
  
   

 

   
   
     
 
  ..



 


 
   
     ... 



 

 




Template Sequence  ETVRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFD. . VPGAYEIPLHARTLAETGR. . . YGAVLGTAFVVNGG
Template Known Secondary structure 


TTTTTT
..SSGGGT
...
S



S
Template Predicted Secondary structure 







..




...




Template SS confidence 















































































   10.........20.........30.........40.........50. ........60.........70 .........80....
 
   671........680.........690........
Predicted Secondary structure  .









Query SS confidence  .



























Query Sequence  . NIADIADNGDANYYLMEAYKHLKPIALA
Query Conservation  .    
   
 
   
 




 




 
Alig confidence  .



























Template Conservation 
 
 
 
   
  

  


   


  
Template Sequence  IYRHEFVASAVIDGMMNVQLSTGVPVLSA
Template Known Secondary structure  SS




Template Predicted Secondary structure 





Template SS confidence 




























   85....90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions