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Job DescriptionP21179
Confidence100.00%DateThu Jan 5 11:38:00 GMT 2012
Rank6Aligned Residues477
% Identity43%Templatec2j2mD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:catalase; PDBTitle: crystal structure analysis of catalase from exiguobacterium2 oxidotolerans
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  YALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPN
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Template Sequence  KKLTTNQGVPIGDNQNSRTAGRRGPTLLEDYQLIEKIAHFDRERVPERVVHARGFGAHGVFKVKNSMKKYTKAAFLQEEG
Template Known Secondary structure 


B
TTS
B
S
SS


BSSTTS
B
TT
TT





SS

S
S

TTT


GGGSSTT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  KITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHD
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Template Sequence  TEVPVFARFSTVIHGTHSPETLRDPRGFSVKFYTEEGNWDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQ. . . . DPD
Template Known Secondary structure 

SSS
TT

TTSS


TTSSSS
S
S
GGGS

TTTSS
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   86...90.........100.........110.........120.........130.........140.........150........ .160.
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  TFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDF
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Template Sequence  RYWDFMTLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRWVPKEGVHNLSADEATEVQGKDFNH
Template Known Secondary structure  SGGGTSGGGSBS
GGG



S

TTS
TT


B


TT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  HRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIV
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Template Sequence  ASNDTFQAIENGDFPEWDLFVQVLDPADVENFDFDPLDATKDWFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLV
Template Known Secondary structure  TT



GGGTTSSSS
TT
TT



TTTS

S
TTT



TT


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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  PGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGP
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Template Sequence  PGMLPSEDKLLQGRLFSYSDTQRHRI. GPNYQQLPINCPFAQVNNYQRDGAMPFKQQTSSVNYEPNRYQDEPKQTPE. . .
Template Known Secondary structure  TT


TTT.
TTGGGSTTT

SS



S



SS
TT



S

SSS
S
TTS



GG...
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   322.......330.........340....... ..350.........360.........370.........380.........390.......
 
   478.480.........490.........500.........510.........520.........530.........540.........550.......
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Query Sequence  KRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQA
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Template Sequence  . . . . YTEDTQPLHDDIHGRLEIEKTNNFGQAGEVYRRMTEEEQMALLNNLVNDLQQVRHENTVLLAICNFYRADASLGEK
Template Known Secondary structure  ....GS







S

SS


S


TTS
TT



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   398.400.........410.........420.........430.........440.........450.........460.........470...
 
   558.560......
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Query Sequence  VAKNLGIEL
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Template Conservation 

  
    
Template Sequence  LSEALNVDI
Template Known Secondary structure  T


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   474.....480..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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