Job Description P21179 Confidence 100.00% Date Thu Jan 5 11:38:00 GMT 2012 Rank 4 Aligned Residues 661 % Identity 50% Template c1sy7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:catalase 1; PDBTitle: crystal structure of the catalase-1 from neurospora crassa, native2 structure at 1.75a resolution. Resolution 1.75 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		Y	A	L	T	T	N	Q	G	V	R	I	A	D	D	Q	N	S	L	R	A	.	.	.	G	S	R	G	P	T	L	L	E	D	F	I	L	R	E	K	I	T	H	F	D	H	E	R	I	P	E	R	I	V	H	A	R	G	S	A	A	H	G	Y	F	Q	P	Y	K	S	L	S	D	I	T	K	A	D	F	L	S
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		A	R	L	T	T	D	Y	G	V	K	Q	T	T	A	D	D	W	L	R	I	V	S	D	D	K	I	G	P	S	L	L	E	D	P	F	A	R	E	R	I	M	R	F	D	H	E	R	I	P	E	R	V	V	H	A	R	G	S	G	A	F	G	K	F	K	V	Y	E	S	A	S	D	L	T	M	A	P	V	L	T
Template Known Secondary structure					B		T	T	S		B		S		S	S								S	S							T	T													T							S	S	S		S											S	S			T	T	T				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	N	K	I	T	P	V	F	V	R	F	S	T	V	Q	G	G	A	G	S	A	D	T	V	R	D	I	R	G	F	A	T	K	F	Y	T	E	E	G	I	F	D	L	V	G	N	N	T	P	I	F	F	I	Q	D	A	H	K	F	P	D	F	V	H	A	V	K	P	E	P	H	W	A	I	P	Q	G	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	S	R	E	T	P	V	F	V	R	F	S	T	V	L	G	S	R	G	S	A	D	T	V	R	D	V	R	G	F	A	V	K	F	Y	T	E	E	G	N	W	D	L	V	G	N	N	I	P	V	F	F	I	Q	D	A	I	K	F	P	D	V	I	H	A	G	K	P	E	P	H	N	E	V	P	Q	A	Q	S
Template Known Secondary structure			S	S												S	S	S		T	T	S		T	T	S	S	S											T	T									S	S	S	S		S		S	S	G	G	G									S		B	T	T	T	T	B		T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	D	T	F	W	D	Y	V	S	L	Q	P	E	T	L	H	N	V	M	W	A	M	S	D	R	G	I	P	R	S	Y	R	T	M	E	G	F	G	I	H	T	F	R	L	I	N	A	E	G	K	A	T	F	V	R	F	H	W	K	P	L	A	G	K	A	S	L	V	W	D	E	A	Q	K	L	T	G	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	N	N	F	W	D	F	Q	F	N	H	T	E	A	T	H	M	F	T	W	A	M	S	D	R	A	I	P	R	S	L	R	M	M	Q	G	F	G	V	N	T	Y	T	L	I	N	A	Q	G	K	R	H	F	V	K	F	H	W	T	P	E	L	G	V	H	S	L	V	W	D	E	A	L	K	L	A	G	Q	D
Template Known Secondary structure			S											G	G	G								T	S	G	G	G	S	B	S		G	G	G	S						S							T	T													T	T				B
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	F	H	R	R	E	L	W	E	A	I	E	A	G	D	F	P	E	Y	E	L	G	F	Q	L	I	P	E	E	D	E	F	K	F	D	F	D	L	L	D	P	T	K	L	I	P	E	E	L	V	P	V	Q	R	V	G	K	M	V	L	N	R	N	P	D	N	F	F	A	E	N	E	Q	A	A	F	H	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	F	H	R	K	D	L	W	E	A	I	E	N	G	A	Y	P	K	W	K	F	G	I	Q	A	I	A	E	E	D	E	H	K	F	D	F	D	I	L	D	A	T	K	I	W	P	E	D	L	V	P	V	R	Y	I	G	E	M	E	L	N	R	N	P	D	E	F	F	P	Q	T	E	Q	I	A	F	C	T	S
Template Known Secondary structure		T	T												T	T														G	G	G	T	T		S	S	S		T	T		T	T					T	T	T	S															S						T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	V	P	G	L	D	F	T	N	D	P	L	L	Q	G	R	L	F	S	Y	T	D	T	Q	I	S	R	L	G	G	P	N	F	H	E	I	P	I	N	R	P	T	C	P	Y	H	N	F	Q	R	D	G	M	H	R	M	G	I	D	T	N	P	A	N	Y	E	P	N	S	I	N	D	N	W	P	R	E	T	P
Query Conservation
Alig confidence																															.																																															.	.	.	.
Template Conservation																															.																																															.	.	.	.
Template Sequence		H	V	V	N	G	I	G	F	S	D	D	P	L	L	Q	G	R	N	F	S	Y	F	D	T	Q	I	S	R	L	.	G	V	N	F	Q	E	L	P	I	N	R	P	V	C	P	V	M	N	F	N	R	D	G	A	M	R	H	T	I	S	R	G	T	V	N	Y	Y	P	N	R	F	D	A	C	P	P	.	.	.	.
Template Known Secondary structure					T	T							T	T											T					T	.		T	T	G	G	G	S	T	T	T			S	S										T	T							S	S			S	S	S		T	T			S			.	.	.	.
Template Predicted Secondary structure																															.																																															.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	P	K	R	G	G	F	E	S	Y	Q	E	R	V	E	G	N	K	V	R	E	R	S	P	S	F	G	E	Y	Y	S	H	P	R	L	F	W	L	S	Q	T	P	F	E	Q	R	H	I	V	D	G	F	S	F	E	L	S	K	V	V	R	P	Y	I	R	E	R	V	V	D	Q	L	A	H	I	D	L	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	L	K	E	G	G	Y	L	E	Y	A	Q	K	V	A	G	I	K	A	R	A	R	S	A	K	F	K	E	H	F	S	Q	A	Q	L	F	Y	N	S	M	S	P	I	E	K	Q	H	M	I	N	A	F	G	F	E	L	D	H	C	E	D	P	V	V	Y	G	R	M	V	Q	R	L	A	D	I	D	L	G	L
Template Known Secondary structure				T	T	T	T											S				S				G	G	G	G			S										S																		T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.			.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		A	Q	A	V	A	K	N	L	G	I	E	L	T	D	D	Q	L	N	I	T	P	P	P	D	V	N	G	L	K	K	D	P	S	L	S	L	Y	A	I	P	D	G	.	.	D	V	K	G	R	V	V	A	I	L	L	N	D	E	V	R	S	A	D	L	L	A	I	L	K	A	L	K	A	K	G	V	H	A	K	L
Query Conservation																																												.	.
Alig confidence																					.	.	.	.	.	.																		.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		A	Q	T	I	A	E	M	V	G	G	E	A	P	T	T	T	N	H	P	.	.	.	.	.	.	N	H	G	R	K	T	I	N	L	S	Q	T	E	F	P	P	A	T	P	T	I	K	S	R	R	V	A	I	I	I	A	D	G	Y	D	N	V	A	Y	D	A	A	Y	A	A	I	S	A	N	Q	A	I	P	L	V
Template Known Secondary structure											S				S			S	S		.	.	.	.	.	.							S	S		S	G	G	G				S	S	S			T	T									T	T	B															T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670			.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	Y	S	R	M	G	E	V	T	A	D	D	G	T	V	L	P	I	A	A	T	F	A	G	A	P	S	L	T	V	D	A	V	I	V	P	C	G	.	.	N	I	A	D	I	A	D	N	G	D	A	N	Y	Y	L	M	E	A	Y	K	H	L	K	P	I	A	L	A	G	D	A	R	K	F	K	A	T	I	K	I
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		I	G	P	R	R	S	K	V	T	A	A	N	G	S	T	V	Q	P	H	H	H	L	E	G	F	R	S	T	M	V	D	A	I	F	I	P	G	G	A	K	A	A	E	T	L	S	K	N	G	R	A	L	H	W	I	R	E	A	F	G	H	L	K	A	I	G	A	T	G	E	A	V	D	L	V	A	K	A	I	A
Template Known Secondary structure				S		S	S				B	T	T	S						S			T	T	T			G	G	G	S	S																T														T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
												711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.															.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	D	Q	G	E	E	G	I	V	E	A	D	S	A	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	M	D	E	L	L	T	L	M	A	A	H	R	V	W	S	R	I	P	K	I	D	K	I
Query Conservation		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																														.	.
Template Sequence		L	P	Q	V	T	V	S	S	E	A	E	V	H	E	S	Y	G	V	V	T	L	K	K	V	K	P	E	S	F	T	D	A	V	K	I	A	K	G	A	A	G	F	L	G	E	F	F	Y	A	I	A	Q	H	R	N	W	D	R	E	L	.	.	D	G	L
Template Known Secondary structure			T	T	S					S	S	S					T	T					S	S			T	T	T	T	T	S					S	T	T		S	S											T		S							.	.	T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.			.	.	730