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Job DescriptionP21179
Confidence100.00%DateThu Jan 5 11:38:00 GMT 2012
Rank1Aligned Residues727
% Identity100%Templatec1p81A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:catalase hpii; PDBTitle: crystal structure of the d181e variant of catalase hpii2 from e. coli
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  DSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLE
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Template Sequence  DSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLE
Template Known Secondary structure 




TTSTTS

SS


TTSS




TT


GGGT



TT


B
TTS
B
S
TT


BSSTTS
B
TT
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  DFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFA
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Template Sequence  DFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVREIRGFA
Template Known Secondary structure 
T





SS

SSS

TTT


GGGS
TT


SSS
TTS
SS
SS

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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  TKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSY
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Template Sequence  TKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSY
Template Known Secondary structure  TTSSSS
S
S
GGGS

TTT


TT


S
GGGSGGGSBS
G
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   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  RTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDE
Query Conservation       





 


  
    

 
  
  
   

 


   

 




  

  

  
  
 
 
 


    
 
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Template Sequence  RTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDE
Template Known Secondary structure  GGS


S

TT

TT


B


TTT


GGGT
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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  FKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGP
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Template Sequence  FKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGP
Template Known Secondary structure  T
SSS
TT
TT



TTTS


S
TTT



TT


TT



SSST
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   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   427..430.........440.........450.........460.........470.........480.........490.........500......
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Query Sequence  NFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYS
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Template Sequence  NFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYS
Template Known Secondary structure  TGGGSGGG

SS



S



TT






S
SSSS
TTTTT
S





SSS


















GGG


S
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   427..430.........440.........450.........460.........470.........480.........490.........500......
 
   507..510.........520.........530.........540.........550.........560.........570.........580......
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Query Sequence  HPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDP
Query Conservation 


 
       

  

      
  
    
  
       

  
  


  


  
                 
 
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Template Sequence  HPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDP
Template Known Secondary structure  S
T
SSTT
T



T





BTTBS

G
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   507..510.........520.........530.........540.........550.........560.........570.........580......
 
   587..590.........600.........610.........620.........630.........640.........650.........660......
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Query Sequence  SLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVI
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Template Sequence  SLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVI
Template Known Secondary structure  GGSSSSS




TT


TT

TT
SSSS
TTS


TTTS
GGG
S
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   587..590.........600.........610.........620.........630.........640.........650.........660......
 
   667..670.........680.........690.........700.........710.........720.........730.........740......
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Query Sequence  VPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIP
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Template Sequence  VPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIP
Template Known Secondary structure 

S
TT
TT

GGGGGGGGTTT

SS
BTTSS

T
S
GGG
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   667..670.........680.........690.........700.........710.........720.........730.........740......
 
   747..750...
Predicted Secondary structure 






Query SS confidence 






Query Sequence  KIDKIPA
Query Conservation   
  


Alig confidence 






Template Conservation   

 


Template Sequence  KIDKIPA
Template Known Secondary structure  TTS

Template Predicted Secondary structure 






Template SS confidence 






   747..750...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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