 |
Job Description | P0A800 | Confidence | 96.90% | Date | Thu Jan 5 11:06:32 GMT 2012 |
Rank | 6 | Aligned Residues | 45 |
% Identity | 22% | Template | d1qkla_ |
SCOP info | RPB6/omega subunit-like
| RPB6/omega subunit-like
| RPB6
|
Resolution | UNK |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | F | D | L | V | L | V | A | A | R | R | A | R | Q | M | Q | V | G | G | K | D | P | L | V | P | E | E | N | . |
D | K | T | T | V | I | A | L | R | E | I | E | E | G | L | I | N |
Query Conservation |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
| . |
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |
|
|
Template Sequence |   |
T | K | Y | E | R | A | R | V | L | G | T | R | A | L | Q | I | A | M | C | . |
A | P | V | M | V | E | L | E | G | E | T | D | P | L | L | I | A | M | K | E | L | K | A | R | K | I | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . |
|
| S | S | S |
| S | S | S | S |
| S | S | S |  |  |  |  |  |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
858 | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | |
. | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|