Job Description P0A800 Confidence 96.96% Date Thu Jan 5 11:06:32 GMT 2012 Rank 4 Aligned Residues 45 % Identity 22% Template c1twcF_ PDB info PDB header:transcription Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23 PDBTitle: rna polymerase ii complexed with gtp Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		N	R	F	D	L	V	L	V	A	A	R	R	A	R	Q	M	Q	V	G	G	K	D	P	L	V	P	E	E	N	.	D	K	T	T	V	I	A	L	R	E	I	E	E	G	L	I	N
Query Conservation																															.
Alig confidence																					.										.
Template Conservation																					.
Template Sequence		T	K	Y	E	R	A	R	I	L	G	T	R	A	L	Q	I	S	M	N	.	A	P	V	F	V	D	L	E	G	E	T	D	P	L	R	I	A	M	K	E	L	A	E	K	K	I	P
Template Known Secondary structure																			T	T	.					S			S	S														T	T
Template Predicted Secondary structure																					.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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