Job Description P0A850 Confidence 74.31% Date Thu Jan 5 11:06:54 GMT 2012 Rank 68 Aligned Residues 86 % Identity 14% Template c2etnA_ PDB info PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 Resolution 3.30 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.					.	.	.	.	.	.	.	200
Predicted Secondary structure																									.	.	.	.																															.	.	.	.	.	.						.	.	.	.
Query SS confidence																									.	.	.	.																															.	.	.	.	.	.						.	.	.	.
Query Sequence		A	D	V	D	G	M	L	D	T	L	R	K	Q	Q	A	T	W	K	E	K	D	G	A	.	.	.	.	V	E	A	E	D	R	V	T	I	D	F	T	G	S	V	D	G	E	E	F	E	G	G	K	A	S	D	F	V	L	.	.	.	.	.	.	A	M	G	Q	G	.	.	.	.	R	M	I	P	G	F	E	D
Query Conservation																									.	.	.	.																															.	.	.	.	.	.						.	.	.	.
Alig confidence																									.	.	.	.										.	.	.	.	.	.	.	.														.	.	.	.	.	.						.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		A	R	I	E	A	R	I	D	S	L	E	D	V	L	S	R	A	V	I	L	E	E	G	T	G	E	V	I	G	L	G	S	V	V	E	L	.	.	.	.	.	.	.	.	E	D	P	A	T	G	E	R	L	S	V	Q	V	V	S	P	A	E	A	S	V	L	E	N	P	M	K	I	S	D	A	S	P	M	G	K
Template Known Secondary structure															T	T	T						T	T		S				S	S	S						.	.	.	.	.	.	.	.			T	T	T											G	G	G		B	S	S	S	S	S					T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	K	G	H	K	A	G	E	E	F	T	I	D	V	T	F	P	E	E	Y	H	A	E	N	L	K	G	K	A	A	K	F	A	I	N	L	K	K	V	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	L	G	H	R	V	G	D	V	L	S	L	D	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	K	E	F	R	V	V	A	I	H
Template Known Secondary structure				T	T			T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.														.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions