Job Description P0A850 Confidence 99.82% Date Thu Jan 5 11:06:54 GMT 2012 Rank 12 Aligned Residues 99 % Identity 23% Template c2d3o1_ PDB info PDB header:ribosome Chain: 1: PDB Molecule:trigger factor; PDBTitle: structure of ribosome binding domain of the trigger factor2 on the 50s ribosomal subunit from d. radiodurans Resolution 3.35 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	G	R	R	V	T	I	T	I	A	A	D	S	I	E	T	A	V	K	S	E	L	V	N	V	A	K	K	V	R	I	D	G	F	R	K	G	K	V	P	M	N	I	V	A	Q	R	Y	G	.	A	S	V	R	Q	D	V	L	G	D	L	M	S	R	N	F	I	D	A	I	I	K	E	K	I	N	P	A	G	A
Query Conservation																																																			.
Alig confidence																																																			.																														.
Template Conservation																																																																																	.
Template Sequence		N	K	V	E	F	K	V	S	V	P	A	A	E	V	N	R	A	Y	D	Q	V	W	A	G	L	A	R	D	V	R	V	P	G	F	R	P	G	K	A	P	R	K	V	I	E	N	R	V	G	K	G	Y	V	E	S	Q	V	R	D	R	L	L	E	T	H	Y	S	Q	G	L	R	E	L	G	L	N	L	V	D	.
Template Known Secondary structure												G	G	G	T													T	T	S		B	T	T	B		T	T				S	T	T					T	T	T	T	S	S																				S							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	Y	V	P	G	E	Y	K	L	G	E	D	F	T	Y	S	V	E	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	V	D	P	Q	D	V	Q	S	G	Q	A	F	E	F	T	V	K	G	E
Template Known Secondary structure											S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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