 |
Job Description | Q9JMT2 | Confidence | 6.96% | Date | Thu Jan 5 12:38:07 GMT 2012 |
Rank | 21 | Aligned Residues | 30 |
% Identity | 27% | Template | d1twfb_ |
SCOP info | beta and beta-prime subunits of DNA dependent RNA-polymerase
| beta and beta-prime subunits of DNA dependent RNA-polymerase
| RNA-polymerase beta
|
Resolution | 2.30 |
|
  |   |
50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | P | S | . |
. |
G | R | W | C | P | V | A | S | S | T | V | P | A | T | G | L | H | Q | H | H | S | D | P | T | H | V |
Query Conservation |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |
|
Template Sequence |   |
L | H | N | T | H | W | G | L | V | C | P | A | E | T | P | E | G | Q | A | C | G | L | V | K | N | L | S | L | M | S | C | I |
Template Known Secondary structure |   |
|
| G | G | G | T | T | T | B |
| S | S |
|
|
| S | G | G | G | B | T | T |  |  |  | B |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
514 | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|