Job Description P24242 Confidence 90.07% Date Wed Jan 25 15:20:45 GMT 2012 Rank 377 Aligned Residues 69 % Identity 13% Template d1p4xa2 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	L	E	V	A	K	R	A	G	V	S	K	A	T	V	S	R	V	L	S	G	N	G	Y	V	S	Q	E	T	K	D	R	V	F	Q	A	V	E	E	S	G	Y	R	P	N	L	L	A	R	N	L	S	A	K	S	T	Q	T	L	G	L	V	V	T	N	T	L	Y	H	G	I	Y	F	S	E	L	L	F	H
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																.	.
Template Sequence		L	L	K	D	L	I	E	T	I	H	H	K	Y	P	Q	T	V	R	A	L	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	K	Q	G	Y	L	I	.	.	.	.	K	E	R	S	T	E	D	E	R	K	I	L	I	H	M	.	.	D	D	A	Q	Q	D	H	A	E	Q	L	L	A	Q
Template Known Secondary structure										S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	S	S		.	.	.	.					S	S	S	T	T							.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.
		83	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	M	A	E	E	K	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Q	L	L	A	D	K	D	H
Template Known Secondary structure						T	S	S	S		G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions