Return to main results Retrieve Phyre Job Id

Job DescriptionP24242
Confidence93.48%DateWed Jan 25 15:20:45 GMT 2012
Rank185Aligned Residues31
% Identity29%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10... ......20.........30.........40......
Predicted Secondary structure 




.










Query SS confidence 












.
































Query Sequence  MTTMLEVAKRAGV. SKATVSRVLSGNGYVSQETKDRVFQAVEESGYR
Query Conservation 
 

 


  


.
  






    

  

 

     



 
Alig confidence 












.










...............






Template Conservation   





    
  
  

  

  ...............

 

 
Template Sequence  PPTRAEIAQRLGFRSPNAAEEHLKA. . . . . . . . . . . . . . . LARKGVI
Template Known Secondary structure 


TT
SS...............TTS
Template Predicted Secondary structure 







...............


Template SS confidence 














































   25....30.........40......... 50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions