Job Description P24242 Confidence 97.75% Date Wed Jan 25 15:20:45 GMT 2012 Rank 88 Aligned Residues 202 % Identity 13% Template c3snrA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: rpd_1889 protein, an extracellular ligand-binding receptor from2 rhodopseudomonas palustris. Resolution 1.49 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.																													.
Query SS confidence																															.	.	.																													.
Query Sequence		T	L	G	L	V	V	T	N	T	L	Y	H	G	I	Y	F	S	E	L	L	F	H	A	A	R	M	A	E	E	.	.	.	K	G	R	Q	L	L	L	A	D	G	K	H	S	A	E	E	E	R	Q	A	I	Q	Y	L	L	D	L	R	.	C	D	A	I	M	I	Y	P	R	F	L	S	V	D	E	I	D	D	I
Query Conservation																															.	.	.																													.
Alig confidence																															.	.	.																													.
Template Conservation
Template Sequence		T	V	G	I	S	V	T	T	T	G	P	A	A	A	L	G	I	P	E	R	N	A	L	E	F	V	V	K	E	I	S	G	H	P	I	K	I	I	V	L	D	D	G	G	D	P	T	A	A	T	T	N	A	R	R	F	V	T	E	S	K	A	D	V	I	X	G	S	S	V	T	P	P	S	V	A	I	S	N	V
Template Known Secondary structure										S	S	T	T										G	G	G	G	S		S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		I	D	A	H	S	Q	P	I	M	V	L	N	R	R	L	R	K	N	S	S	H	.	.	.	.	S	V	W	C	D	H	K	Q	T	S	F	N	A	V	A	E	L	I	N	A	G	H	Q	E	I	A	F	L	T	G	S	M	D	S	P	T	S	I	E	R	L	A	G	Y	K	D	A	L	A	Q	H	G	I	A	L
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																														.	.
Template Conservation																																																								.	.
Template Sequence		A	N	E	A	Q	I	P	H	I	A	L	A	P	L	P	I	T	P	E	R	A	K	W	S	V	V	X	P	Q	P	I	P	I	X	G	K	V	L	Y	E	H	X	K	K	N	N	V	K	T	V	G	Y	I	G	.	.	Y	S	D	S	Y	G	D	L	W	F	N	D	L	K	K	Q	G	E	A	X	G	L	K	I
Template Known Secondary structure						T						S	S						T	T	T	T	T	T					S																	T	T									.	.		S	S																	T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	K	L	I	A	N	G	K	W	T	P	A	S	G	A	E	G	V	E	M	L	L	E	R	G	A	K	F	S	A	L	V	A	S	N	D	D	M	A	I	G	A	M	K	A	L	H	E	R	G	V	A	V	P
Query Conservation
Alig confidence														.	.																.
Template Conservation														.	.																.
Template Sequence		V	G	E	E	R	F	A	R	P	D	T	S	.	.	V	A	G	Q	A	L	K	L	V	A	A	N	P	D	A	.	I	L	V	G	A	S	G	T	A	A	A	L	P	Q	T	T	L	R	E	R	G	Y	N	G	L
Template Known Secondary structure									T	T		S		.	.														S		.																				T	T			S
Template Predicted Secondary structure														.	.																.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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