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Job DescriptionP24242
Confidence91.29%DateWed Jan 25 15:20:45 GMT 2012
Rank321Aligned Residues207
% Identity10%Templatec3kg2A_
PDB info PDB header:membrane protein, transport proteinChain: A: PDB Molecule:glutamate receptor 2; PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90....... ..100.........110.........120.........130.......
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Query Sequence  TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLA. . . DGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDII
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Template Sequence  QIGGLFP. . . RGADQEYSAFRVGMVQFSTSEFRLTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFC
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   13...... 20.........30.........40.........50.........60.........70.........80.........
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  DAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLI
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Template Sequence  GTLHVSFITPSFPTDGTHPFVIQMRPD. LKGALLSLIEYYQWDKFAYLY. . . DSDRGLSTLQAVLDSAAEKKWQVTAINV
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   90.........100.........110...... ...120.........130....... ..140.........150.........160.....
 
   218.220.........230.........240.........250 .........260.........270....
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Query Sequence  ANGKWTPASGAEGVEMLLERGAKFSALVASNDD. MAIGAMKALHERGVAVPEQVSVIG
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Template Sequence  GNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIA
Template Known Secondary structure  SS

SSSTTTTTTTTTTTT



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   166...170.........180.........190.........200.........210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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