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Job DescriptionP24242
Confidence100.00%DateWed Jan 25 15:20:45 GMT 2012
Rank13Aligned Residues264
% Identity22%Templatec3d8uA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:purr transcriptional regulator; PDBTitle: the crystal structure of a purr family transcriptional regulator from2 vibrio parahaemolyticus rimd 2210633
Resolution2.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  QTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDA
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Template Sequence  YSIALII. . PSLFEKACAHFLPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS. QRTHQLLEA
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   71...... ..80.........90.........100.........110.........120.........130........ .140.......
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  HSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIAN
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Template Sequence  SNTPVLEIAELSSKASYLNIGVDHFEVGKACTRHLIEQGFKNVGFIGARGNHSTLQRQLHGWQSAXIENYLTPDHFLTTH
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  GKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMI
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Template Sequence  EAPSSQLGAEGLAKLLLRDSSLNALVCSHEEIAIGALFECHRRVLKVPTDIAIICLEGSSXGEHAYPSLTSAEFDYERXG
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   300.........310.........320.........330..
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Query Sequence  QEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLI
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Template Sequence  TKAAEKLLHAIKGES. . . . . . XGFKLKRRASTA
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   308.310.........320.. .......330....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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