Job Description P24242 Confidence 100.00% Date Wed Jan 25 15:20:45 GMT 2012 Rank 21 Aligned Residues 273 % Identity 24% Template c3bblA_ PDB info PDB header:regulatory protein Chain: A: PDB Molecule:regulatory protein of laci family; PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans Resolution 2.35 Å

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		59	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		T	Q	T	L	G	L	V	V	T	.	.	N	T	L	Y	H	G	I	Y	F	S	E	L	L	F	H	A	A	R	M	A	E	E	K	G	R	Q	L	L	L	A	D	G	K	H	S	A	E	E	E	R	Q	A	I	Q	Y	L	L	D	L	R	C	D	A	I	M	I	Y	P	R	F	L	S	V	D	E	I	D	D	I
Query Conservation											.	.
Alig confidence											.	.																																																															.
Template Conservation																																																																											.
Template Sequence		S	F	X	I	G	Y	S	W	T	Q	T	E	P	G	Q	V	N	H	I	L	D	Q	F	L	S	S	X	V	R	E	A	G	A	V	N	Y	F	V	L	P	F	P	F	S	E	D	R	S	Q	I	D	I	Y	R	D	L	I	R	S	G	N	V	D	G	F	V	L	S	S	I	N	Y	N	.	D	P	R	V	Q	F
Template Known Secondary structure														T	T		S			T															T	T										S	S	T	T											T	T			S						S			T	T	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	H	S	Q	P	I	M	V	L	N	R	R	L	R	K	N	S	S	H	S	V	W	C	D	H	K	Q	T	S	F	N	A	V	A	E	L	I	N	A	G	H	Q	E	I	A	F	L	T	G	S	M	D	S	P	T	S	I	E	R	L	A	G	Y	K	D	A	L	A	Q	H	G	I	A	L	N	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	Q	K	F	P	F	V	A	F	G	R	S	N	P	D	W	D	F	A	W	V	D	I	D	G	T	A	G	T	R	Q	A	V	E	Y	L	I	G	R	G	H	R	R	I	A	I	L	A	W	P	E	D	S	R	V	G	N	D	R	L	Q	G	Y	L	E	A	X	Q	T	A	Q	L	P	I	E	T	G	Y
Template Known Secondary structure					T	T							S			S	T	T																									T											T	T																		T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		I	A	N	G	K	W	T	P	A	S	G	A	E	G	V	E	M	L	L	E	R	G	.	.	A	K	F	S	A	L	V	A	S	N	D	D	M	A	I	G	A	M	K	A	L	H	E	R	G	V	A	V	P	E	Q	V	S	V	I	G	F	D	D	I	A	I	A	P	Y	T	V	P	A	L	S	S	V	K	I	P
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		I	L	R	G	E	G	T	F	E	V	G	R	A	X	T	L	H	L	L	D	L	S	P	E	R	R	P	T	A	I	X	T	L	N	D	T	X	A	I	G	A	X	A	A	A	R	E	R	G	L	T	I	G	T	D	L	A	I	I	G	F	D	D	A	P	X	V	Q	Y	L	F	P	P	L	S	S	V	R	Q	P
Template Known Secondary structure							S	S													T	S		T	T	T	S		S					S	S														T	T			B	T	T	T	B						S			T	T	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		V	T	E	M	I	Q	E	I	I	G	R	L	I	F	M	L	D	G	G	D	F	S	P	.	P	K	T	F	S	G	K	L	I	R	R	D	S	L	I
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	A	E	A	G	R	K	C	I	E	L	L	V	A	I	V	E	G	R	E	P	E	Q	K	H	I	L	L	Q	P	S	L	I	I	R	A	S	E	G
Template Known Secondary structure																		T	T				S													B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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