Job Description P24242 Confidence 91.38% Date Wed Jan 25 15:20:45 GMT 2012 Rank 314 Aligned Residues 78 % Identity 21% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		T	M	L	E	V	A	K	R	A	G	V	S	K	A	T	V	S	R	V	L	S	G	N	G	Y	V	S	Q	E	T	K	D	R	V	F	Q	A	V	E	E	S	G	Y	R	P	N	L	L	A	R	N	L	S	A	K	S	T	Q	T	L	G	L	.	.	.	.	V	V	T	N	T	L	Y	H	G	I	Y	F	S	E
Query Conservation																																																																.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.											.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	E	F	L	V	E	.	.	.	.	.	.	.	A	L	G	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I	L	S	L
Template Known Secondary structure										S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	S			.	.	.	.	.	.	.			S	S	S	S						T								T	T	T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	F	H	A	A	R	M	A	E	E	K	G	R	Q	L	L	L	A	D	G	K	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	P	Y	L	R	S	L	A	E	E	L	D	E	S	V	S	L	A	S	L	A	G	D
Template Known Secondary structure													S		S									T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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