|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . | |
|
|
|
. | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . |  |
|
|
|
|  | . | . | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
|
|
Query Sequence |   |
L | T | A | Y | T | L | R | L | G | D | N | C | L | V | L | S | Q | R | L | G | E | . |
W | C | G | H | A | P | E | L | E | I | D | L | A | L | A | N | I | G | L | D | L | L | G | Q | A | R | N | F | L | S | Y | A | A | E | L | A | G | E | G | D | E | D | T | L | . |
. |
A | F | T | R | D | E | . |
. |
. |
. |
R | Q |
Query Conservation |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |
| . |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|
|   |
|   |   |   |
|
|   |
| . | . |
|   |   |
|   |   | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
I | G | N | L | L | A | L | S | I | S | S | D | N | L | V | N | K | Y | L | I | E | N | F | S | A | Q | L | Q | N | P | E | G | K | S | F | Y | G | F | Q | I | M | M | E | N | I | Y | S | E | V | Y | S | M | M | V | D | A | F | F | K | D | P | K | N | I | P | L | F | K | E | I | A | N | L | P | E | V | K | H | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G |
| S | S | T | T |
| S | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
|
. | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
F | S | N | L | L | L | V | E | Q | P | N | G | N | F | A | D | T | I | A | R | Q | Y | F | I | D | A | W | . |
. |
. |
. |
H | V | A | L | F | T | R | L | . |
M | E | S | R | D | P | Q | L | A | A | I | S | A | K | A | I | K | E | A | R | Y | H | L | R | F | S | R | G | W | L | E | R | L | . |
. |
G | N | G | T | D |
Query Conservation |   |
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|   |   | . | . | . | . |   |   |   |   |
|   |
|
| . |   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
| . | . |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | F | I | E | R | W | I | S | N | D | D | S | L | Y | A | E | R | L | V | A | F | A | A | K | E | G | I | F | Q | A | G | N | Y | A | S | M | F | W | L | T | D | K | K | I | M | P | G | L | A | M | A | N | R | N | I | C | R | D | R | G | A | Y | T | D | F | S | C | L | L | F | A | H | L | R | T | K | P | N | P | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | G | Q | K | M | Q | Q | A | I | N | K | L | W | R | F | T | A | E | L | F | D | A | D | E | I | D | I | A | L | S | E | E | G | I | . |
A | V | D | P | R | T | L | R | A | A | W | E | A | E | V | F | A | G | I | N | E | A | T | L | N | V | P |
Query Conservation |   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
| . |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
I | I | E | K | I | I | T | E | A | V | E | I | E | K | E | Y | Y | S | N | S | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | K | F | G | M | D | L | K | S | I | H | T | Y | I | E | F | V | A | D | G | L | L | Q | G | F | G | N | E | K | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| . | . | . | . | . | . | . | . | . | . | S | T | T | T | T | S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
  |