Job Description P76079 Confidence 100.00% Date Thu Jan 5 12:18:19 GMT 2012 Rank 2 Aligned Residues 211 % Identity 18% Template c3pw1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa; PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	A	Y	T	L	R	L	G	D	N	C	L	V	L	S	Q	R	L	G	E	W	C	G	H	A	P	E	L	E	I	D	L	A	L	A	N	I	G	L	D	L	L	G	Q	A	R	N	F	L	S	Y	A	A	E	L	A	G	E	G	D	E	D	T	L	A	F	T	R	D	E	R	Q	F	S	N	L	L	L
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		T	L	I	R	Q	I	G	Q	H	A	H	S	E	I	V	G	M	L	P	E	G	N	W	I	T	R	A	P	T	L	R	R	K	A	I	L	L	A	K	V	Q	D	E	A	G	H	G	L	Y	L	Y	S	A	A	E	T	L	G	.	.	C	A	R	E	D	I	Y	Q	K	M	L	D	G	R	M	K	Y	S	S	I
Template Known Secondary structure																	T						T	T	G	G	G		S	S																											T	T	T	.	.													T	S	S				G	G
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q	P	N	G	N	F	A	D	T	I	A	R	Q	Y	F	I	D	A	W	H	V	A	L	F	T	R	L	M	E	S	R	D	P	Q	L	A	A	I	S	A	K	A	I	K	E	A	R	Y	H	L	R	F	S	R	G	W	L	E	R	L	G	N	G	T	D	V	S	G	Q	K	M	Q	Q	A	I	N	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	Y	P	T	L	S	W	A	D	I	G	V	I	G	W	L	V	D	G	A	A	I	V	N	Q	V	A	L	C	R	T	S	Y	G	P	Y	A	R	A	M	V	K	I	C	K	E	E	S	F	H	Q	R	Q	G	F	E	A	C	M	A	L	A	Q	G	S	E	A	Q	K	Q	M	L	Q	D	A	I	N	R	F
Template Known Secondary structure		G	G	S				S																						G	G	G		S	B																														T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.			.			.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure														.	.		.	.										.
Query SS confidence														.	.		.	.										.
Query Sequence		W	R	F	T	A	E	L	F	D	A	D	E	.	.	I	.	.	D	I	A	L	S	E	E	G	I	.	A	V	D	P	R	T	L	R	A	A	W	E	A	E	V	F	A	G	I	N	E	A	T	L	N	V	P	Q	E	Q	A
Query Conservation														.	.		.	.										.
Alig confidence														.	.		.	.										.
Template Conservation
Template Sequence		W	W	P	A	L	M	M	F	G	P	N	D	D	N	S	P	N	S	A	R	S	L	T	W	K	I	K	R	F	T	N	D	E	L	R	Q	R	F	V	D	N	T	V	P	Q	V	E	M	L	G	M	T	V	P	D	P	D	L
Template Known Secondary structure								T	T		S		T	T	S		T	T							T	T	S		S	S																				T	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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