Job Description P76079 Confidence 99.97% Date Thu Jan 5 12:18:19 GMT 2012 Rank 3 Aligned Residues 224 % Identity 18% Template c3pm5B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:benzoyl-coa oxygenase component b; PDBTitle: crystal structure of boxb in mixed valent state with bound benzoyl-coa Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		N	Q	L	T	A	Y	T	L	R	L	G	D	N	C	L	V	L	S	Q	R	L	G	E	W	C	G	H	A	P	E	L	E	I	D	L	A	L	A	N	I	G	L	D	L	L	G	Q	A	R	N	F	L	S	Y	A	A	E	L	A	G	E	G	D	E	D	T	L	A	F	T	R	D	E	R	Q	F	S	N	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		S	T	L	R	R	I	I	V	T	Q	G	D	T	E	P	A	S	V	E	Q	Q	R	H	L	G	L	T	A	P	S	L	Y	D	L	R	N	L	F	Q	V	N	V	E	E	G	R	H	L	W	A	M	V	Y	L	L	H	A	H	F	G	R	D	G	R	E	E	G	E	A	L	L	E	R	R	S	G	D	E	D	N
Template Known Secondary structure																							T	T	G	G	G	G		S																														S																T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.																																																																									.	.	.	.	.
Query SS confidence		.	.	.																																																																									.	.	.	.	.
Query Sequence		.	.	.	L	L	L	V	E	Q	P	N	G	N	F	A	D	T	I	A	R	Q	Y	F	I	D	A	W	H	V	A	L	F	T	R	L	M	E	S	R	D	P	Q	L	A	A	I	S	A	K	A	I	K	E	A	R	Y	H	L	R	F	S	R	G	W	L	E	R	L	G	N	G	T	D	V	S	.	.	.	.	.
Query Conservation		.	.	.																																																																									.	.	.	.	.
Alig confidence		.	.	.																																																																									.	.	.	.	.
Template Conservation
Template Sequence		P	R	I	L	T	A	F	N	E	K	T	P	D	W	L	S	F	F	M	F	T	F	I	T	D	R	D	G	K	F	Q	L	A	S	L	A	E	S	A	F	D	P	L	A	R	T	C	K	F	M	L	T	E	E	A	H	H	L	F	V	G	E	S	G	I	A	R	V	I	Q	R	T	C	E	V	M	K	E	L	G
Template Known Secondary structure				S	S	G	G	G	S	S				S											T												T	T		S	B																																								T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
							152	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.		.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.					.	.	.	.	.	.	.	.	.																										.	.					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.					.	.	.	.	.	.	.	.	.																										.	.					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	G	Q	K	M	.	.	.	.	.	.	.	.	.	Q	Q	A	I	N	K	L	W	R	F	T	A	E	L	F	D	A	D	E	I	D	I	A	L	S	.	.	E	E	G	I	.	A	V	D	P	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.					.	.	.	.	.	.	.	.	.																										.	.					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.					.	.	.	.	.	.	.	.	.																										.	.					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	D	P	A	K	L	R	A	A	G	V	I	D	L	P	T	L	Q	K	Y	L	N	F	H	Y	S	V	T	S	D	L	Y	G	A	E	I	S	S	N	A	A	T	Y	Y	T	N	G	L	K	G	R	F	E	E	E	K	I	G	D	D	H	K	L	Q	N	S	E	Y	E	V	M	D	V	A	G	D	K	I	L
Template Known Secondary structure											T	T																				G	G	G			S	S										T	T	S	S			T	T	G	G	G			S		S	S		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
															191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	A	W	E	A	E	V	F	A	G	I	N	E	A	.	.	.	.	.	.	.	.	.	.	.	T	L	N	V	P	Q	E	Q	A	Y	R	T	.	G	G	K	K	G	L	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		T	R	H	V	P	A	L	S	A	L	N	E	R	L	R	D	D	W	I	T	D	V	Q	A	G	V	D	R	W	N	R	I	P	A	K	F	G	F	D	F	R	F	T	L	P	H	K	G	F	H	R	K	I	G	M	F	A	D	V	H
Template Known Secondary structure							G	G	G	G																											T	T										T	T	T	T			S	S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions