Job Description P76079 Confidence 46.83% Date Thu Jan 5 12:18:19 GMT 2012 Rank 76 Aligned Residues 169 % Identity 11% Template c3oqlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tena homolog; PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution Resolution 2.54 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.																											.
Query SS confidence																																						.	.	.	.	.	.																											.
Query Sequence		N	Q	L	T	A	Y	T	L	R	L	G	D	N	C	L	V	L	S	Q	R	L	G	E	W	C	G	H	A	P	E	L	E	I	D	L	A	.	.	.	.	.	.	L	A	N	I	G	L	D	L	L	G	Q	A	R	N	F	L	S	Y	A	A	E	L	A	G	E	G	.	D	E	D	T	L	A	F	T	R	D	E
Query Conservation																																						.	.	.	.	.	.																											.
Alig confidence																																						.	.	.	.	.	.																											.
Template Conservation
Template Sequence		Q	I	X	R	Q	Y	L	I	G	G	W	P	V	V	E	Q	F	A	V	Y	X	A	K	N	L	T	K	T	R	F	G	R	H	P	G	E	D	X	A	R	R	W	L	X	R	N	I	R	V	E	L	N	H	A	D	Y	W	V	N	W	C	A	A	H	D	V	T	L	E	D	L	H	D	Q	R	V	A	P	E	L
Template Known Secondary structure																											T	T			T	T	S																		T	T	T											T	T	T									T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	F	S	N	L	L	L	V	E	Q	P	N	G	N	F	A	D	T	I	A	R	Q	Y	F	I	D	A	W	H	V	A	L	F	T	R	L	M	E	S	R	D	.	.	.	.	.	.	.	.	.	.	P	Q	L	A	A	I	S	A	K	A	I	K	E	A	R	Y	H	L	R	F	S	R	G	W	L	E	R	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	L	S	H	W	C	W	Q	T	S	S	S	D	S	L	A	V	A	X	A	A	T	N	Y	A	I	E	G	A	T	G	E	W	S	A	V	V	C	S	T	G	V	Y	A	E	A	F	A	E	E	T	R	K	K	S	X	K	W	L	K	X	H	A	Q	Y	D	A	H	P	W	E	A	L	E	I	I	C	T	L
Template Known Secondary structure		G													S									T	T	T															S	S	S					T	S																	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		145			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		G	.	.	N	G	T	D	V	S	G	Q	K	M	Q	Q	A	I	N	K	L	W	R	F	T	A	E	L	F
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		V	G	N	K	P	S	L	Q	L	Q	A	E	L	R	Q	A	V	T	K	S	Y	D	Y	X	Y	L	F	L
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions