|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |
|
|
|
|  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
N | Q | L | T | A | Y | T | L | R | L | G | D | N | C | L | V | L | S | Q | R | L | G | E | W | C | G | H | A | P | E | L | E | I | D | L | A | L | A | N | I | G | L | D | L | L | G | Q | A | R | N | F | L | S | Y | A | A | E | L | A | G | E | G | . |
. |
. |
. |
D | E | D | T | L | A | F | T | R | D | E | . |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|
|   |
|   |   | . | . | . | . |   |
|
|   |
|
|   |   |
|   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
Template Sequence |   |
K | Q | L | L | R | L | L | V | P | L | R | H | V | E | L | G | A | N | M | N | N | A | K | I | A | G | D | A | T | A | T | T | V | S | Q | M | H | I | Y | T | G | M | D | R | L | G | I | G | Q | Y | L | S | R | I | A | L | M | I | D | G | S | T | G | A | A | L | D | E | S | K | A | Y | W | M | D | D | E | M | W | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
  |   |
|
|
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
R | Q | F | S | N | L | L | L | V | E | Q | P | N | G | N | F | A | D | T | I | A | R | Q | Y | F | I | . |
. |
. |
. |
. |
. |
D | A | W | H | V | A | L | F | T | R | L | M | E | S | R | D | P | Q | L | A | A | I | S | A | K | A | I | K | E | A | R | Y | H | L | R | F | S | R | G | W | L | E | R | L | G | N |
Query Conservation |   |
. | . |   |   |
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|
|   | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
Alig confidence |   |
. | . |
|
|
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   | . | . |
|
|   |
| . |
|   |   |   |
|
|   |
|   |   |
|
|   |
|
|
|   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
P | M | R | K | L | . |
. |
V | E | D | T | . |
L | V | V | D | D | W | F | E | L | T | L | V | Q | N | I | L | I | D | G | M | M | Y | P | L | V | Y | D | K | M | D | Q | W | F | E | S | Q | G | A | E | D | V | S | M | L | T | E | F | M | R | D | W | Y | K | E | S | L | R | W | T | N | A | M | M | K | A | V | A | G |
Template Known Secondary structure |   |
 |  |  |  |  | . | . |  |  |  |  | . | T | T |
|
|
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | T | T |
| G | G | G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | |
|
. | . | . | . | |
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | D | V | S | G | Q | K | M | Q | Q | A | I | N | K | L | W | R | F | T | A | E | L | F | D | A | D | E | I | D | I | A | L | S | E | E | G | I | A | V | D | P | R | T | L | R | A | A | W | E | A | E | V | F | A | G | I | N | E | A | T | L | N | V | P | Q | E |
Query Conservation |   |
|
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
Template Sequence |   |
E | S | E | T | N | R | E | L | L | Q | K | W | I | D | H | W | E | P | Q | A | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | K | P | L | A | E | A | S | V | G | I | D | G | L | N | E | A | R | A | E | L | S | A | R | L | K | K | F | E | L | Q | S | R | G | V |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |