Job Description P76079 Confidence 88.33% Date Thu Jan 5 12:18:19 GMT 2012 Rank 47 Aligned Residues 198 % Identity 11% Template c1syyA_ PDB info PDB header:replication,oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain; PDBTitle: crystal structure of the r2 subunit of ribonucleotide reductase from2 chlamydia trachomatis Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	T	A	Y	T	L	R	L	G	D	N	C	L	V	L	S	Q	R	L	G	E	W	C	.	G	H	A	P	E	L	E	I	D	L	A	L	A	N	I	G	L	D	L	L	G	Q	A	R	N	F	L	S	Y	A	A	E	L	A	G	E	G	D	E	D	T	L	A	F	T	R	D	E	R	Q	F	S	N	L	L	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	L	L	N	L	G	F	F	S	T	A	E	S	L	V	G	N	N	I	V	L	A	I	F	K	H	V	T	N	P	E	A	R	Q	Y	L	L	R	Q	A	F	E	E	A	V	H	T	H	T	F	L	Y	I	C	E	S	L	G	L	D	E	K	E	I	F	N	A	Y	N	E	R	A	A	I	K	A	K	D	D	F
Template Known Secondary structure																							T																																				T							T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		83	.	.	.	.	.	.																	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		V	E	Q	P	N	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	D	T	I	A	R	Q	.	.	.	.	.	.	.	Y	F	I	D	A	W	H	V	A	L	F	T	R	L	M	E	S	R	D	P	Q	L	A	A	I	S	A	K	A	I	K	E	A	R	Y	H	L	R	F	S	R	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.														.
Template Conservation																																																					.
Template Sequence		Q	M	E	I	T	G	K	V	L	D	P	N	F	R	T	D	S	V	E	G	L	Q	E	F	V	K	N	L	V	G	Y	Y	I	I	M	E	G	I	F	F	Y	S	G	F	V	M	I	L	S	F	H	.	R	Q	N	K	M	I	G	I	G	E	Q	Y	Q	Y	I	L	R	D	E	T	I	H	L	N	F	G	I	D
Template Known Secondary structure					T	T	S	G	G	G	S	T	T			S	S	S																T	T	T	T	T	T														.		T	T	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.										.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		W	L	E	R	L	G	N	G	T	.	.	.	.	.	.	.	.	.	D	V	S	G	Q	K	M	Q	Q	A	I	N	K	L	W	R	F	T	A	E	L	F	D	A	D	E	I	D	I	A	L	S	E	E	G	I	A	V	D	P	R	T	L	R	A	A	W	E	A	E	V	F	A	G	I	N	E	A	T	L	N	V
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		L	I	N	G	I	K	E	E	N	P	E	I	W	T	P	E	L	Q	Q	E	I	V	E	L	I	K	R	A	V	D	L	E	I	E	Y	A	Q	D	C	L	P	R	G	I	.	.	.	.	.	.	.	.	.	L	G	L	R	A	S	M	F	I	D	Y	V	Q	H	I	A	D	R	R	L	E	R	I	G	L	K	P
Template Known Secondary structure											G	G	G																													S	S		B	.	.	.	.	.	.	.	.	.	T	T	B																				T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		211
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		308

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions