|   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  | . | . |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | A | L | F | G | R | E | A | P | V | T | L | E | I | G | F | G | M | G | A | S | L | V | A | M | A | K | D | R | P | E | Q | D | F | L | G | I | E | V | H | S | P | G | V | G | A | C | L | A | S | A | H | E | E | G | L | S | N | L | R | V | M | C | H | D | A | V | E | V | . |
. |
L | H | K | M | I | P | D | N |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   | . | . |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | E | F | L | K | P | E | D | E | K | I | I | L | D | C | T | V | G | E | G | G | H | S | R | A | I | L | E | H | C | P | G | C | R | I | I | G | I | D | V | D | S | E | V | L | R | I | A | E | E | K | L | K | E | F | S | . |
D | R | V | S | L | F | K | V | S | Y | R | E | A | D | F | L | L | K | T | L | G | I | E |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T |
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | G | G | G | T | . | T | T |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | R | M | V | Q | L | F | F | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | W | H | K | A | R | H | N | K | R | R | I | V | Q | V | P | F | A | E | L | V | K | S | K | L | Q | L | G | G | V | F | H | M | A | T | D | W | E | P | Y | A | E | H | M | L | E | V | M | S | S | I | D | G | Y | K | N | L | S | E | S |
Query Conservation |   |
|   |   |   |
|   |   |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | V | D | G | I | L | X | D | L | G | V | S | T | Y | Q | L | K | G | E | N | R | E | L | E | N | L | . |
. |
. |
. |
. |
. |
. |
. |
K | E | F | L | K | K | A | E | D | L | L | N | P | G | G | R | I | V | V | I | S | F | H | S | L | E | D | R | I | V | K | E | T | F | R | N | S | K | K | L | R | I | L | T | E | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S |
|
|  |  |  |  |  | T |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  | S |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | Y | V | P | R | P | A | S | R | P | V | T | K | F | E | Q | R | G | H | R | L | G | H | G | V | W | D | L | M | F | E | R | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
| . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
P | V | R | P | . |
. |
. |
. |
. |
. |
. |
. |
S | E | E | E | I | R | E | N | P | R | A | R | S | G | R | L | R | A | A | E | R | I |
Template Known Secondary structure |   |
| B |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
  |