Job Description P0A8I5 Confidence 31.46% Date Thu Jan 5 11:07:56 GMT 2012 Rank 418 Aligned Residues 44 % Identity 16% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		N	S	L	R	M	V	Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	.	.	.	.	.	S	K	L	Q	L	G	G	V	F	H	M	A
Query Conservation																																				.	.	.	.	.
Alig confidence																	.	.																		.	.	.	.	.
Template Conservation																	.	.
Template Sequence		G	R	Y	D	L	V	V	I	N	I	H	T	P	F	R	.	.	I	H	H	Y	Q	Q	C	V	D	H	A	X	K	L	Q	X	L	G	G	D	S	L	R	L	L	K	P	G	G	S	L	L	I	R
Template Known Secondary structure																	.	.	S	S																			G	G	G	G
Template Predicted Secondary structure																	.	.
Template SS confidence
		1212	.	.	.	.	.	.	.	1220	.	.	.	.	.	.			.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions