Job Description P0A8I5 Confidence 97.00% Date Thu Jan 5 11:07:56 GMT 2012 Rank 305 Aligned Residues 161 % Identity 14% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																										.	.	.																													.	.	.	.	.
Query SS confidence																										.	.	.																													.	.	.	.	.
Query Sequence		E	A	P	V	T	L	E	I	G	F	G	M	G	A	S	L	V	A	M	A	K	D	R	P	.	.	.	E	Q	D	F	L	G	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	S	N	.	.	.	.	.	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S
Query Conservation																										.	.	.																													.	.	.	.	.
Alig confidence																										.	.	.																													.	.	.	.	.								.
Template Conservation																																																																					.
Template Sequence		E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T	I	T	G	E	.	D	V	C	S	L	N	P	E	D	F	A	N
Template Known Secondary structure		T	T						T	T		T	T	S									T	S	T	T			G	G	G						S		G	G	G										T	T	S	T	T	T		B	T	T	B								.		G	G	G			G	G	G	G	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		L	R	M	V	Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	L	V	K	S	K	L	Q	L	G	G	V	F	H	M	A	T	D	W	E	P	Y	A	.	.	.	.	.	.	E	H
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A	I	X	P	K	Q	Y	L	T	A	Q	G	N	E	S	K	A
Template Known Secondary structure										B			S	S																			S	S			S	S		S	S	S															S		T	T									T							S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D	Y	V	P	R	P	A	S	R	P	V	T	K	F	E	Q	R	G	H	R	L	G	H	G	V	W	D	L	M	F	E	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	E	F	L	V	G	N	F	G	L	E	H	I	F	L	Y	P	R	E	G	L	F	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	K	D	T	V	V	F	V	G	R	K
Template Known Secondary structure							T	T	T	T										B			S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.		B										T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.														.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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