Job Description P0A8I5 Confidence 99.05% Date Thu Jan 5 11:07:56 GMT 2012 Rank 241 Aligned Residues 144 % Identity 13% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	R	E	A	P	V	T	L	E	I	G	F	G	M	G	A	S	L	V	A	M	A	K	D	R	P	E	Q	D	F	L	G	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S	L	R	M	V	Q
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	P	T	I	K	G	V	N	F	D	L	P	H	V	I	.	.	.	.	.	.	.	S	E	A	P	Q	F	P	G	V	T	H	V	G	G	D	M	F	K	.	.	.	.	.	.	E	V	P	S	G	D	T	I	L
Template Known Secondary structure		T	T	T	T		S						T		T	T	S											T	T													.	.	.	.	.	.	.	T	T					T	T						S		T	T	T	.	.	.	.	.	.						S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	G	V	F	H	M	A	T	D	W	.	.	.	.	.	.	.	.	.	.	.	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D	Y	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																																															.	.	.	.	.	.	.	.
Template Sequence		M	K	W	I	.	.	.	.	.	.	L	H	D	W	S	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S	S	Q	G	V	F	H	V	D	M	I	M	L	A	H	N	P	G	G	R	E	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		.	.	.	.	.	.	G	G	G	B																S		T	T										B		S	S			S	S																	S	S	B				.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.																																																															.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	P	A	S	R	P	V	T	K	F	E	Q	R	G	H	R	L	G	H	G	V	W	D	L	M	F
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	R	Y	E	R	E	F	Q	A	L	A	R	G	A	G	F	T	G	V	K	S	T	Y
Template Known Secondary structure		.	.	.	.	.		B												T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions