 |
Job Description | P0A8I5 | Confidence | 77.86% | Date | Thu Jan 5 11:07:56 GMT 2012 |
Rank | 358 | Aligned Residues | 59 |
% Identity | 22% | Template | c3ihtB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:s-adenosyl-l-methionine methyl transferase; |
PDBTitle: crystal structure of s-adenosyl-l-methionine methyl transferase2 (yp_165822.1) from silicibacter pomeroyi dss-3 at 1.80 a resolution
|
Resolution | 1.80 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | R | I | R | S | F | V | R | R | Q | G | R | L | T | K | G | Q | E | H | A | L | E | N | Y | W | P | V | M | G | V | E | F | S | E | D | M | L | D | F | P | A | L | F | G | R | E | A | P | V | T | L | E | I | G | F | G | M | G | A | S | L | V | A | M | A | K | D | R | P | E | Q | D | F | L | G | I | E |
Query Conservation |   |
  |
|   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |
|   |
| . | . | . | . | . |
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|   |
|   |
|   |
|
|
|
Template Sequence |   |
Q | S | R | L | D | L | F | I | D | R | . |
. |
. |
. |
. |
X | V | S | Q | R | A | C | L | E | H | A | I | A | Q | T | A | G | L | S | G | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | Y | E | L | G | L | G | N | G | R | T | Y | H | H | L | R | Q | H | V | Q | G | R | E | I | Y | V | F | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|