Job Description P0A8I5 Confidence 64.18% Date Thu Jan 5 11:07:56 GMT 2012 Rank 375 Aligned Residues 145 % Identity 14% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

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		64	.		.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure				.										.	.	.	.	.	.																			.
Query SS confidence				.										.	.	.	.	.	.																			.
Query Sequence		A	P	.	V	T	L	E	I	G	F	G	M	.	.	.	.	.	.	G	A	S	L	V	A	M	A	K	D	R	P	E	Q	D	F	L	G	.	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S	L
Query Conservation				.										.	.	.	.	.	.																			.
Alig confidence				.										.	.	.	.	.	.																			.						.	.	.																					.	.	.	.	.
Template Conservation																																												.	.	.																					.	.	.	.	.
Template Sequence		A	P	I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	L	Y	S	P	K	I	.	.	.	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	T	.	.	.	.	.	L	E	S	F	A	S	S	S	T	I
Template Known Secondary structure										S			S	S	S	S	S	G	G	G	T								T	T	T	T									S	S		.	.	.										T	T		T	T					S	S	.	.	.	.	.								S	S
Template Predicted Secondary structure																																												.	.	.																					.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.						.	.	.
Query SS confidence																																							.	.	.	.	.	.						.	.	.
Query Sequence		R	M	V	Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	.	.	.	.	.	.	G	V	F	H	M	.	.	.	A	T	D	W	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D
Query Conservation																																							.	.	.	.	.	.						.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.						.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	M	I	V	I	A	I	Q	V	A	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I	S	L	Q	G	R
Template Known Secondary structure		S						S		G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G		T	T								S	S			S	S															T								G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.															100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		Y	V	P	R	P	A	S	R	P	V	T	K	F	E	Q	R	G	H	R	L	G	H	.	.	G	V	W	D	L	M	F	E
Query Conservation																								.	.
Alig confidence				.	.	.	.	.	.															.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		K	S	.	.	.	.	.	.	P	Y	I	L	R	A	K	E	L	I	S	Q	G	Y	I	G	D	I	N	S	I	E	I	A
Template Known Secondary structure		G		.	.	.	.	.	.												T	T	T	T		S
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		154	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions