Job Description P0A8I5 Confidence 99.39% Date Thu Jan 5 11:07:56 GMT 2012 Rank 189 Aligned Residues 152 % Identity 16% Template c3bt7A_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase; PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma2 in complex with 19 nucleotide t-arm analogue Resolution 2.43 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	L	F	G	R	E	A	P	V	T	L	E	I	G	F	G	M	G	A	S	L	V	A	M	A	K	D	R	P	E	Q	D	F	L	G	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S	L	R	.
Query Conservation																																																																																	.
Alig confidence																													.	.																																																			.
Template Conservation																													.	.
Template Sequence		D	V	T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	.	.	F	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R
Template Known Secondary structure				T	T	T			S						S		T	T	S							G	G	G	.	.	S	S																						T	T			S								S								S	S					T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
											137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	V	Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	G	V	F	H	M	A	T	D	W	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D	Y
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	.	.	.	.	.	.	.	.	.	.	.	L	D	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S	Q	T	H	K	V	E	R	L	A	L	F	D	Q	F
Template Known Secondary structure		G	G	G	S		G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.										T	T	S	S							S																											S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.												.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	R	P	A	S	R	P	V	T	K	F	E	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	T	H	H	M	Q	C	G	V	L	L	T	A	K
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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