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Job Description | P0A8I5 | Confidence | 98.97% | Date | Thu Jan 5 11:07:56 GMT 2012 |
Rank | 249 | Aligned Residues | 122 |
% Identity | 20% | Template | c3adnB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:spermidine synthase; |
PDBTitle: crystal structure of spermidine synthase from e. coli.
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Resolution | 2.90 Å |
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56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | P | A | L | F | G | R | E | A | P | V | T | L | E | I | G | F | G | M | G | A | S | L | V | A | M | A | K | D | R | P | E | Q | D | F | L | G | I | E | V | H | S | P | G | V | G | A | C | L | A | S | A | H | E | E | G | L | S | N | L | R | V | M | C | H | D | A | V | E | V | L | H | K | M | I | P | D | N | S | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | P | L | L | A | H | G | H | A | K | H | V | L | I | I | G | G | G | D | G | A | M | L | R | E | V | T | R | H | K | N | V | E | S | I | T | M | V | E | I | D | A | G | V | V | S | F | C | R | Q | Y | L | P | N | H | N | A | G | S | Y | D | D | P | R | F | K | L | V | I | V | . |
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N | Q | T | S | Q | T | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
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140 | . | . | . | . | . | . |
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136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
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180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | M | V | Q | L | F | F | P | D | P | W | H | K | A | R | H | N | K | R | R | I | V | Q | V | P | F | A | E | L | V | K | S | K | L | Q | L | G | G | V | F | H | M | A | T | . |
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D | W | E | P | Y | A | E | H | M | L | E | V | M | S | S | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | V | I | I | S | D | C | T | S | A | . |
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F | Y | E | G | C | K | R | C | L | N | P | G | G | I | F | V | A | Q | N | G | V | C | F | L | Q | Q | E | E | A | I | D | S | H | R | K | L | S | H | Y |
Template Known Secondary structure |   |
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| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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153 | . | . | . | . | . | . | 160 | . | . | |
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. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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