 |
Job Description | P0A8I5 | Confidence | 99.53% | Date | Thu Jan 5 11:07:56 GMT 2012 |
Rank | 134 | Aligned Residues | 125 |
% Identity | 14% | Template | c3a4tA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative methyltransferase mj0026; |
PDBTitle: crystal structure of atrm4 from m.jannaschii with sinefungin
|
Resolution | 2.30 Å |
|
 |
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
P | A | L | F | G | R | E | A | P | V | T | L | E | I | G | F | G | M | G | A | S | L | V | A | M | A | K | D | . |
R | P | E | Q | D | F | L | G | I | E | V | H | S | P | G | V | G | A | C | L | A | S | A | H | E | E | G | L | S | N | L | R | V | M | C | H | D | A | V | E | V | L | H | K | M | I | . |
P | D | N | S |
Query Conservation |   |
  |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   | . |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   | . |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | V | L | N | P | R | E | D | D | F | I | L | D | M | C | A | A | P | G | G | K | T | T | H | L | A | Q | L | M | K | N | K | G | T | I | V | A | V | E | I | S | K | T | R | T | K | A | L | K | S | N | I | N | R | M | G | V | L | N | T | I | I | I | N | A | D | M | R | K | Y | K | D | Y | L | L | K | N | E | I | F |
Template Known Secondary structure |   |
 |  |  |
|
|
| T | T |
|  |  |  |  | S | S |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | M | V | Q | L | F | F | P | D | P | W | H | K | A | R | H | N | K | R | R | I | . |
. |
V | Q | V | P | F | A | E | L | V | K | S | K | L | Q | L | G | G | V | F | H | M | A | T | D | W |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|   | . | . |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
Template Sequence |   |
F | D | K | I | L | L | D | A | P | C | S | G | N | I | S | E | E | D | I | K | Y | C | S | L | R | Q | K | E | L | I | D | I | G | I | D | L | L | K | K | D | G | E | L | V | Y | S | T | C | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|