Job Description P0A8I5 Confidence 99.74% Date Thu Jan 5 11:07:56 GMT 2012 Rank 20 Aligned Residues 152 % Identity 16% Template c2pwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase Resolution 1.70 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																													.
Query SS confidence																									.																													.
Query Sequence		R	E	A	P	V	T	L	E	I	G	F	G	M	G	A	S	L	V	A	M	A	K	D	.	R	P	E	Q	D	F	L	G	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	.	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S	L	R	M	V	Q
Query Conservation																									.																													.
Alig confidence																									.																													.														.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		A	P	G	M	R	V	L	E	A	G	T	G	S	G	G	L	T	L	F	L	A	R	A	V	G	E	K	G	L	V	E	S	Y	E	A	R	P	H	H	L	A	Q	A	E	R	N	V	R	A	F	W	Q	V	E	N	V	R	F	H	L	G	K	L	E	E	A	.	.	.	E	L	E	E	A	A	Y	D	G	V	A
Template Known Secondary structure			T	T									T	T	S											T	T	T	S							S																										S		G	G	G		.	.	.				T	T
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	G	V	F	H	M	A	T	D	W	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	.	.	.	.	.	.	.	.	G	Y	K	N	L	S	E	S	N	D	Y	V	P	R	P
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	L	M	E	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	E	K	A	A	L	A	L	K	P	D	R	F	L	V	A	Y	L	P	N	I	T	Q	V	L	E	L	V	R	A	A	E	A	H	P	F	R	L	E	R	V	L	E	V	G	W	R	E	W	E	V	R	L	P	V	A	H	P
Template Known Secondary structure				S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																			S												G	G	G	T	T																		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	R	P	V	T	K	F	E	Q	R	G	H	R	L	G	H	G	V	W	D	L	M	F	E	R	V	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	Q	Q	.	.	.	.	.	.	.	.	.	.	V	G	H	T	A	F	L	V	A	L	R	R	W	K
Template Known Secondary structure			S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.											240	.	.	.	.	.	.	.	.	.	250	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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