Job Description P0A8I5 Confidence 99.29% Date Thu Jan 5 11:07:56 GMT 2012 Rank 209 Aligned Residues 138 % Identity 16% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		F	P	A	L	F	G	R	E	A	P	V	T	L	E	I	G	F	G	M	G	A	S	L	V	A	M	A	K	D	R	P	E	Q	D	F	L	G	I	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	.	.	.	.	E	G	L	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.																				.	.
Template Conservation																																																																															.	.
Template Sequence		V	P	M	T	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	.	.	V
Template Known Secondary structure							S	S	S										T	T									T		T	T									S																	G	G	G	G	S	T	T						S							T	T	.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		D	N	S	L	R	M	V	Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	G	V	F	H	M	A	T	.	.	.	.	D	W	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D	Y
Query Conservation																																																		.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Sequence		T	N	T	Y	D	V	I	I	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G	Y	A	K	K	L	.	.	F	K	K	V	E	Y	A	N	I	S
Template Known Secondary structure			S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T	T	T														T	T	.	.		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.																	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.
		208	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	R	P	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	T	Y	P	C
Template Known Secondary structure			T	T	S	G	G
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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