Job Description P0A8I5 Confidence 62.19% Date Thu Jan 5 11:07:56 GMT 2012 Rank 377 Aligned Residues 147 % Identity 14% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		66	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																		.
Query SS confidence													.	.	.	.	.	.																		.
Query Sequence		V	T	L	E	I	G	F	G	M	G	A	.	.	.	.	.	.	S	L	V	A	M	A	K	D	R	P	E	Q	D	F	L	G	I	.	E	V	H	S	P	G	V	G	A	C	L	A	S	A	H	E	E	G	L	S	N	L	R	V	M	C	H	D	A	V	E	V	L	H	K	M	I	P	D	N	S	L	R	M	V
Query Conservation													.	.	.	.	.	.																		.
Alig confidence													.	.	.	.	.	.																		.					.	.	.																					.	.	.	.	.
Template Conservation																																									.	.	.																					.	.	.	.	.
Template Sequence		R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	.	.	.	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	.	.	.	.	.	L	E	S	F	A	Q	Y	K	D	I	D	M	I
Template Known Secondary structure							S			S	T	T	S					T								T	T	T	T									S	S		.	.	.										T	T		T	T					S		.	.	.	.	.								T	T		S
Template Predicted Secondary structure																																									.	.	.																					.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		Q	L	F	F	P	D	P	W	H	K	A	R	H	N	K	R	R	I	V	Q	V	P	F	A	E	L	V	K	S	K	L	Q	L	G	.	.	.	.	.	.	G	V	F	H	M	A	T	D	W	E	P	Y	A	E	H	M	L	E	V	M	S	S	I	D	G	Y	K	N	L	S	E	S	N	D	Y	V	P	R	P	A
Query Conservation																																				.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	S	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	H	Y	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T	I	I	C	L	Q	G	R	K	S
Template Known Secondary structure					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T	T		S	S								S	S	S	S	S	S													T		T	T								G	G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		S	R	P	V	T	K	F	E	Q	R	G	H	R	L	G	H	.	.	G	V	W	D	L	M	F	E
Query Conservation																		.	.
Alig confidence		.	.															.	.
Template Conservation		.	.
Template Sequence		.	.	P	Y	I	V	R	A	K	E	L	I	S	E	G	C	I	G	D	I	N	S	I	E	I	S
Template Known Secondary structure		.	.												T	T	T	T		S
Template Predicted Secondary structure		.	.
Template SS confidence
				157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions