Job Description P16456 Confidence 100.00% Date Thu Jan 5 11:35:11 GMT 2012 Rank 7 Aligned Residues 285 % Identity 20% Template c3mcqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamine-monophosphate kinase; PDBTitle: crystal structure of thiamine-monophosphate kinase (mfla_0573) from2 methylobacillus flagellatus kt at 1.91 a resolution Resolution 1.91 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		L	H	S	E	Q	A	K	F	V	D	P	N	L	L	V	G	N	E	T	R	D	D	A	A	V	Y	D	L	G	N	G	T	S	V	I	S	T	T	D	F	F	M	.	.	.	.	.	P	I	V	D	N	P	F	D	F	G	R	I	A	A	T	N	A	I	S	D	I	F	A	M	G	G	K	P	I	M	A	I	A
Query Conservation																																												.	.	.	.	.
Alig confidence																			.	.																								.	.	.	.	.
Template Conservation																			.	.
Template Sequence		L	I	Q	R	Y	F	R	R	A	H	P	S	A	V	L	G	V	.	.	G	D	D	A	A	L	I	Q	P	S	P	G	X	E	L	A	V	S	A	D	X	L	V	A	N	T	H	F	Y	P	N	I	D	P	W	L	I	G	W	K	S	L	A	V	N	I	S	D	X	A	A	X	G	A	Q	P	R	W	A	T	L
Template Known Secondary structure						S								T	T	T			.	.		G	G	G	G						T	T														T	T	S				S																				T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	W	P	I	N	K	L	S	P	E	I	A	R	E	V	T	E	G	G	R	Y	A	C	R	Q	A	G	I	A	L	A	G	G	H	S	I	D	A	P	E	P	I	F	G	L	A	V	T	G	I	V	P	T	E	R	V	K	K	N	S	T	A	Q	A	G	C	K	L	F	L	T	K	P	L	G	I	G	V
Query Conservation
Alig confidence							.	.																																				.
Template Conservation							.	.																																				.
Template Sequence		T	I	A	L	P	.	.	E	A	D	E	D	W	I	S	K	F	A	A	G	F	F	A	C	A	A	Q	F	D	I	A	L	I	G	G	D	T	T	R	G	P	L	.	T	I	S	V	Q	I	X	G	E	T	P	P	G	A	S	L	L	R	S	T	A	R	A	D	D	D	I	W	V	S	G	P	L	G	D	A	A
Template Known Secondary structure						S	.	.	S																				T	T											S	S		.												T	T					S	S				T	T							S			S
Template Predicted Secondary structure							.	.																																				.
Template SS confidence
		85	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		185	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		L	T	T	A	E	K	K	S	L	L	K	.	.	.	P	E	H	Q	G	L	A	T	E	V	M	C	R	M	N	I	A	G	A	S	F	A	N	I	E	G	V	K	A	M	T	D	V	T	G	F	G	L	L	G	H	L	S	E	M	C	Q	G	A	G	V	Q	A	R	V	D	Y	E	A	I	P	K	L	P	G	V
Query Conservation													.	.	.
Alig confidence													.	.	.																																				.
Template Conservation																																																			.
Template Sequence		L	A	L	A	A	I	Q	G	R	Y	P	L	S	D	T	E	L	A	A	C	G	K	A	L	H	Q	P	Q	P	R	V	V	L	G	Q	A	L	R	G	L	A	H	S	A	L	D	I	S	D	.	G	L	L	A	D	L	G	H	I	L	E	H	S	Q	V	G	A	E	V	W	L	K	A	I	P	K	S	E	V	V
Template Known Secondary structure								T	T	S	S																											T	T	T	T								S	S	.														T							G	G	G	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Y	I	K	L	G	A	V	P	G	G	T	E	R	N	F	A	S	Y	G	H	L	M	G	E	M	P	R	E	V	R	D	L	L	C	D	P	Q	T	S	G	G	L	L	L	A	V	M	P	E	A	E	N	E	V	K	A	T	A	A	E	F	G	I	E	L	T	A	I	G	E	L	V	P	A	R	G	G	R
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	H	S	Q	E	V	A	I	Q	K	X	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	D	Y	E	L	C	F	T	A	S	T	Q	H	R	Q	Q	I	A	D	I	G	R	Q	L	S	L	D	X	A	V	I	G	R	I	T	D	T	Q	Q	L	V
Template Known Secondary structure				T	T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											G	G	G											T	T											S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.																							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		342
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions