Job Description P16456 Confidence 100.00% Date Thu Jan 5 11:35:11 GMT 2012 Rank 23 Aligned Residues 241 % Identity 18% Template c3kizA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution Resolution 1.50 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		D	F	G	R	I	A	A	T	N	A	I	S	D	I	F	A	M	G	G	K	P	I	M	A	I	A	I	L	G	W	P	I	N	K	L	S	P	E	I	A	R	E	V	T	E	G	G	R	Y	A	C	R	Q	.	.	.	.	.	.	.	.	.	A	G	I	A	L	A	G	G	H	S	I	D	A	P	E	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																													.				.	.																					.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																													.				.	.
Template Sequence		G	I	A	Q	D	A	V	I	X	N	I	D	D	L	I	C	V	G	A	V	D	N	I	L	L	S	S	.	T	I	G	.	.	R	N	K	N	L	I	P	G	E	V	L	A	A	I	I	N	G	T	E	E	V	L	Q	X	L	R	D	N	G	I	G	I	Y	S	T	G	G	E	T	A	D	V	G	D	L	V	R
Template Known Secondary structure																G	G	G	T			S	S						.				.	.			T	T	T	S																						T	T														T	T	T		S
Template Predicted Secondary structure																													.				.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
			147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.												180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.																																		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	P	I	F	G	L	A	V	T	G	I	V	P	T	E	R	V	K	K	N	S	T	A	Q	A	G	C	K	L	F	L	T	K	P	.	.	.	.	.	.	.	.	.	.	.	L	G	I	G	V	L	T	T	A	E	K	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	I	V	D	S	T	V	T	C	R	X	K	R	Q	D	V	I	S	N	E	N	I	K	A	G	N	V	I	V	G	F	A	S	Y	G	Q	T	S	Y	E	T	E	Y	N	G	G	X	G	S	N	G	L	T	S	A	R	H	D	V	F	N	N	V	L	A	S	K	Y	P	E	S	F	D	P	K	V	P	E	N
Template Known Secondary structure		S													G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B				T	T	S	S									B		T							G	G	G	S		T	T	S		G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	P	E	H	Q	G	L	A	T	E	V	M	C	R	M	N	I	A	G	A	S	F	A	N	.	.	I	E	G	V	K	A	M	T	D	V	T	G	F	G	L	L	G	H	L	S	E	M	C	Q	G	A	G	V	Q	A	R	V	D	Y	E	A	I	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																						.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		L	V	Y	S	G	E	X	N	L	T	D	P	Y	L	N	V	P	L	D	A	G	K	L	V	L	S	P	T	R	T	Y	A	P	L	X	K	E	I	I	H	Q	Y	K	G	K	L	D	G	V	V	H	C	S	G	G	G	Q	T	K	V	L	H	F	.	.	.	T	D	A	T	T	H	I	I	K	D	N	L	F	D
Template Known Secondary structure		G	S	S		S	S	B		T	T				T	T		S	S																								S	T	T			S							T	T	G	G	G	G	G	G	G	G	.	.	.			T	T							S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	G	V	E	E	Y	I	K	L	G	A	V	P	G	G	T	E	R	N	F	A	S	Y	G	H	L	M	G	E	M	P	R	E	V	R	D	L	L	C	D	P	Q	T	S	G	G	L	L	L	A	V	M	P	E	A	E	N	E	V	K	A	T	A	A	E	F	G	I	E	L	T	A	I	G	E	L	V	P
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	P	L	F	Q	L	I	Q	G	Q	S	N	T	P	W	E	E	X	Y	K	V	F	N	X	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	E	I	Y	T	D	A	A	H	A	E	G	X	I	A	I	A	K	K	F	N	I	E	A	K	I	I	G	R	V	E	A
Template Known Secondary structure														T										S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T											S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																					.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
			337	.	.	340	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	R	G	G	R	A	M	V	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	V	A	G	K	R	L	T	I	T
Template Known Secondary structure			B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions