Job Description P16456 Confidence 100.00% Date Thu Jan 5 11:35:11 GMT 2012 Rank 9 Aligned Residues 273 % Identity 21% Template c2z1eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hype from thermococcus kodakaraensis (outward2 form) Resolution 1.55 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		E	T	R	D	D	A	A	V	Y	D	L	G	N	G	T	S	V	I	S	T	T	D	F	F	M	.	.	P	I	V	D	N	P	F	D	F	G	R	I	A	A	T	N	A	I	S	D	I	F	A	M	G	G	K	P	I	M	A	I	A	I	L	G	W	P	I	N	K	L	S	P	E	I	A	R	E	V	T	E	G
Query Conservation																											.	.
Alig confidence																.											.	.																																									.
Template Conservation																.																																																					.
Template Sequence		G	E	L	D	D	G	A	T	I	P	F	G	D	K	.	H	I	V	F	T	I	D	G	H	T	V	K	P	L	F	F	P	G	G	D	I	G	R	L	A	V	S	G	T	V	N	D	L	A	V	M	G	A	E	P	I	A	L	A	N	S	M	I	I	G	E	G	.	L	D	M	E	V	L	K	R	V	L	K	S
Template Known Secondary structure						S							T	T		.												S	S	S			T	T																	T	T	T														T	T	.
Template Predicted Secondary structure																.																																																					.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																										.																																			.
Query SS confidence																										.																																			.
Query Sequence		G	R	Y	A	C	R	Q	A	G	I	A	L	A	G	G	H	S	I	D	A	P	E	P	I	.	F	G	L	A	V	T	G	I	V	P	T	E	R	V	K	K	N	S	T	A	Q	A	G	C	K	L	F	L	T	K	P	L	G	I	.	G	V	L	T	T	A	E	K	K	S	L	L	K	P	E	H	Q	G	L	A
Query Conservation																										.																																			.
Alig confidence																										.																																			.
Template Conservation
Template Sequence		M	D	E	T	A	R	E	V	P	V	P	I	V	T	G	D	T	K	V	V	E	D	K	I	E	M	F	V	I	T	A	G	I	G	I	A	E	H	P	V	S	D	A	G	A	K	V	G	D	A	V	L	V	S	G	T	I	G	D	H	G	I	A	L	M	S	H	R	E	G	I	A	F	E	T	E	L	K	S	D
Template Known Secondary structure									T	T												S	S	S														S	S				T	T				T	T						S	S		S	S											T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	V	M	C	R	M	N	I	A	G	A	S	F	A	N	I	E	G	V	K	A	M	T	D	V	T	G	F	G	L	L	G	H	L	S	E	M	C	Q	G	A	G	V	Q	A	R	V	D	Y	E	A	I	P	K	L	P	G	V	E	E	Y	I	K	L	G	A	V	P	G	G	T	E	R	N	F	A	S	Y	G
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		V	A	P	I	W	D	V	V	K	A	V	A	E	T	I	G	W	E	N	I	H	A	M	K	D	P	T	R	A	G	L	S	N	A	L	N	E	I	A	R	K	S	N	V	G	I	L	V	R	E	A	D	I	P	I	R	P	E	V	R	A	A	S	E	M	L	G	I	S	P	Y	D	.	.	.	.	.	.	.	.
Template Known Secondary structure																		G	G	G									T	T														T							G	G	G	S														T			G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		H	L	M	G	E	M	P	R	E	V	R	D	L	L	C	D	P	Q	T	S	G	G	L	L	L	A	V	M	P	E	A	E	N	E	V	K	A	T	A	A	E	F	.	.	G	I	E	L	T	A	I	G	E	L	V	P	A	R	G	G	R	A	M	V	E
Query Conservation																																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	E	G	K	V	V	M	V	V	A	R	E	Y	A	E	E	A	L	E	A	M	R	K	T	E	K	G	R	N	A	A	I	I	G	E	V	I	A	D	Y	R	G	K	V	L	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S								G	G	G										T	S	S	T	T	T	T									S	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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