Job Description P16456 Confidence 100.00% Date Thu Jan 5 11:35:11 GMT 2012 Rank 12 Aligned Residues 290 % Identity 21% Template c2yxzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin-monophosphate kinase; PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8 Resolution 1.90 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		C	K	I	S	P	K	V	L	E	T	I	L	H	S	E	Q	A	K	F	V	D	P	N	L	L	V	G	N	E	T	R	D	D	A	A	V	Y	D	L	G	N	G	T	S	V	I	S	T	T	D	.	.	.	.	F	F	M	P	I	V	D	N	P	F	D	F	G	R	I	A	A	T	N	A	I	S	D	I	F	A
Query Conservation																																																				.	.	.	.
Alig confidence							.	.	.																					.	.																					.	.	.	.
Template Conservation							.	.	.																					.	.
Template Sequence		K	D	L	G	E	.	.	.	R	A	L	L	A	R	L	A	P	L	G	Y	P	P	E	A	P	L	P	P	.	.	G	D	D	A	G	G	V	W	A	E	G	R	A	W	L	L	K	T	D	G	F	L	Y	R	E	V	A	L	K	G	M	G	P	F	E	V	G	F	R	G	V	A	A	T	A	S	D	L	L	A
Template Known Secondary structure							.	.	.								T	T	T	T			T	T		S	S		T	.	.	T	S	S	S						T	T																		T	T
Template Predicted Secondary structure							.	.	.																					.	.
Template SS confidence
		4	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	G	K	P	I	M	A	I	A	I	L	G	W	P	I	N	K	L	S	P	E	I	A	R	E	V	T	E	G	G	R	Y	A	C	R	Q	A	G	I	A	L	A	G	G	H	S	I	D	A	P	E	P	I	F	G	L	A	V	T	G	I	V	P	T	E	R	V	K	K	N	S	T	A	Q	A	G	C	K	L
Query Conservation
Alig confidence																			.																																					.	.																.
Template Conservation																			.																																					.	.																.
Template Sequence		K	M	G	R	P	L	G	F	T	L	G	L	F	L	P	E	D	.	L	E	E	G	F	V	L	E	L	V	R	G	A	A	E	A	A	K	R	L	G	A	F	L	L	G	G	D	T	N	R	G	V	E	V	A	.	.	L	T	V	S	G	Y	A	L	A	E	A	P	L	P	R	.	K	A	L	P	G	D	L	L
Template Known Secondary structure		T	T														T	T	.																				T	T												S	S			.	.										S	S				S	.				T	T
Template Predicted Secondary structure																			.																																					.	.																.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.
		175	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	L	T	K	P	.	L	G	I	G	V	L	T	T	A	E	K	K	S	L	L	K	P	E	H	Q	G	L	A	T	E	V	M	C	R	M	N	I	A	G	A	S	F	A	N	I	E	G	V	K	A	M	T	D	V	T	G	F	G	L	L	G	H	L	S	E	M	C	Q	G	A	G	V	Q	A	R	V	D	Y	E
Query Conservation							.
Alig confidence							.																																																			.											.	.	.
Template Conservation																																																										.											.	.	.
Template Sequence		Y	L	A	G	D	R	W	G	R	T	G	A	A	I	R	A	H	Y	E	G	R	S	L	E	G	F	P	K	I	R	E	A	A	F	Y	P	L	P	R	L	E	L	L	A	L	S	G	L	L	R	G	S	L	D	S	S	.	D	G	L	A	E	T	L	W	Q	L	.	.	.	A	D	L	G	V	G	V	E	V	E
Template Known Secondary structure					S	S		T	T												T				T	T															G	G	G	G	G	G	T	T	T		S						S	.	S										.	.	.		T	T	T
Template Predicted Secondary structure																																																										.											.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	P	K	L	P	G	V	E	E	Y	I	K	L	G	A	V	P	G	G	T	E	R	N	F	A	S	Y	G	H	L	M	G	E	M	P	R	E	V	R	D	L	L	C	D	P	Q	T	S	G	G	L	L	L	A	V	M	P	E	A	E	N	E	V	K	A	T	A	A	E	F	G	I	E	L	T	A	I	G	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	P	L	Y	P	D	V	L	A	F	A	G	S	E	E	A	A	L	E	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	G	G	E	E	F	E	A	V	L	V	V	P	Q	E	G	A	A	A	V	E	A	R	A	K	A	K	G	L	P	L	F	R	A	G	R
Template Known Secondary structure														S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													S	T	T											T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	A	R	G	G	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	G	E	G	V	Y	L
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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