Job Description P16456 Confidence 100.00% Date Thu Jan 5 11:35:11 GMT 2012 Rank 11 Aligned Residues 277 % Identity 20% Template c1vqvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thiamine monophosphate kinase; PDBTitle: crystal structure of thiamine monophosphate kinase (thil)2 from aquifex aeolicus Resolution 2.65 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		C	K	I	S	P	K	V	L	E	T	I	L	H	S	E	Q	A	K	F	V	D	P	N	L	L	V	G	N	E	T	R	D	D	A	A	V	Y	D	L	G	N	G	T	S	V	I	S	T	T	D	F	F	M	.	.	.	.	.	P	I	V	D	N	P	F	D	F	G	R	I	A	A	T	N	A	I	S	D	I	F
Query Conservation																																																							.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.											.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		K	E	L	G	E	F	G	L	I	D	L	I	K	K	T	L	E	S	.	.	.	.	.	.	.	.	.	.	K	V	I	D	D	T	A	P	V	E	.	.	.	.	.	K	L	L	L	T	T	D	V	L	N	E	G	V	H	F	L	R	S	Y	I	P	E	A	V	G	W	K	A	I	S	V	N	V	S	D	V	I
Template Known Secondary structure																		T		.	.	.	.	.	.	.	.	.	.	T	T				B					.	.	.	.	.											B	T	T	T	B		T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	G	K	P	I	M	A	I	A	I	L	G	W	P	I	N	K	L	S	P	E	I	A	R	E	V	T	E	G	G	R	Y	A	C	R	Q	A	G	I	A	L	A	G	G	H	S	I	D	A	P	E	P	I	F	G	L	A	V	T	G	I	V	P	T	E	R	V	K	K	N	S	T	A	Q	A	G	C	K
Query Conservation
Alig confidence																				.																																														.	.
Template Conservation																				.																																														.	.
Template Sequence		A	N	G	G	L	P	K	W	A	L	I	S	L	N	L	P	E	D	.	L	E	V	S	Y	V	E	R	F	Y	I	G	V	K	R	A	C	E	F	Y	K	C	E	V	V	G	G	N	I	S	K	S	E	K	I	G	I	S	V	F	L	V	G	E	T	.	.	E	R	F	V	G	R	D	G	A	R	L	G	D	S
Template Known Secondary structure		T	T	T														T	T	.	S																				T												S	S												.	.	S	S				S	S				T	T
Template Predicted Secondary structure																				.																																														.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		L	F	L	T	K	P	L	G	I	G	V	L	T	T	A	E	K	K	S	L	L	K	P	E	H	Q	G	L	.	.	.	A	T	E	V	M	C	R	M	N	I	A	G	A	S	F	A	N	I	E	G	V	K	A	M	T	D	V	T	G	F	G	L	L	G	H	L	S	E	M	C	Q	G	A	G	V	Q	A	R	V
Query Conservation																														.	.	.
Alig confidence																														.	.	.																														.
Template Conservation																																																														.
Template Sequence		V	F	V	S	G	T	L	G	D	S	R	A	G	L	E	L	L	L	X	E	K	E	E	Y	E	P	F	E	L	A	L	I	Q	R	H	L	R	P	T	A	R	I	D	Y	V	K	H	I	Q	K	Y	A	N	A	S	X	D	I	S	D	.	G	L	V	A	D	A	N	H	L	A	Q	R	S	G	V	K	I	E	I
Template Known Secondary structure						S		S	S											T	T		S	S														S					G	G	G									S							S	.													T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	E	A	I	P	K	L	P	G	V	E	E	Y	I	K	L	G	A	V	P	G	G	T	E	R	N	F	A	S	Y	G	H	L	M	G	E	M	P	R	E	V	R	D	L	L	C	D	P	Q	T	S	G	G	L	L	L	A	V	M	P	E	A	E	N	E	V	K	A	T	A	A	E	F	G	I	E	L	T	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		L	S	E	K	L	P	L	S	N	E	L	K	X	Y	C	E	K	Y	G	K	N	P	I	E	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	G	G	E	D	Y	Q	L	L	F	T	H	P	K	E	R	W	N	P	F	.	.	.	.	.	.	.	.	L	D	X	T	E
Template Known Secondary structure			G	G	G	S													T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													G	G	G			S	S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.
		331	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	L	V	P	A	R	G	G	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	R	V	E	E	G	E	G	V	F	V
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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