Return to main results Retrieve Phyre Job Id

Job DescriptionP33022
Confidence5.56%DateThu Jan 5 11:50:57 GMT 2012
Rank74Aligned Residues114
% Identity14%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20... ......30......... 40.........50.........60.........70.........80..
Predicted Secondary structure 



..





...























Query SS confidence 















. .















. . .










































Query Sequence  LDCDPGHDDAIAIMMA. . AKHPAIDLLGITIVAG. . . NQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIH
Query Conservation 



 
 

  

  
..
    
 
 


   
...
        
   

      


  
   

           
Alig confidence 















..















...










































Template Conservation 
  
  

   
   
  
   

 

   




   

  

  
             

 

   
  
 
  
  
Template Sequence  FDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASA
Template Known Secondary structure  B
TTS
B
TT
SSSGGGTGGGS
TTTS


SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   83......90 .........100.........110....... ..120.
Predicted Secondary structure 







.














.
Query SS confidence 







.


























.



Query Sequence  GETGLDGP. VFEPLTRQAESTHAVKYIIDTLMASDG. DITL
Query Conservation 
  

   .             
   
         . 


Alig confidence 







.


























.



Template Conservation     


 
 
  
 
   
   
      
       

 
Template Sequence  KRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVV
Template Known Secondary structure  T
S


SS


TTT

Template Predicted Secondary structure 
















Template SS confidence 








































   96...100.........110.........120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions