Return to main results Retrieve Phyre Job Id

Job DescriptionP33022
Confidence42.56%DateThu Jan 5 11:50:57 GMT 2012
Rank13Aligned Residues62
% Identity15%Templatec2hmaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae
Resolution2.41 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50.........60....
Predicted Secondary structure 











...








Query SS confidence 




































. . .

























Query Sequence  EKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVA. . . GNQTLDKTLINGLNVCQKLEINVPVY
Query Conservation   
  





 
 

  

  

    
 
 


   ...

        
   

      


 
Alig confidence 
























.










...

























Template Conservation     













 
 

   .
 

 

              
   
  

  



  

Template Sequence  SKTRVVVGXSGGVDSSVTALLLKEQ. GYDVIGIFXKNWDDTDCTATEDYKDVVAVADQIGIPYYSV
Template Known Secondary structure  GGS

SST.T







T

Template Predicted Secondary structure 






.
















Template SS confidence 

































































   5....10.........20......... 30.........40.........50.........60.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions