Job Description P05041 Confidence 16.75% Date Thu Jan 5 10:58:36 GMT 2012 Rank 19 Aligned Residues 52 % Identity 19% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		S	E	I	Q	T	R	P	I	K	G	T	L	P	R	L	P	D	P	Q	E	D	S	K	Q	A	V	K	L	A	N	S	A	K	D	R	A	E	N	L	M	I	V	D	L	M	R	N	D	I	.	.	G	R	V	A	V	A	G	S	V
Query Conservation																																																			.	.
Alig confidence																																			.	.	.	.	.	.											.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		G	S	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K	R	Q	N	P	T	.	.	.	.	.	.	M	F	A	W	E	I	R	D	R	L	L	A	E	G	V	C	D	N	D	T	V
Template Known Secondary structure		S																	T	T													S	S	.	.	.	.	.	.	S													T		S		T	T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions