Job Description P0AD35 Confidence 3.82% Date Thu Jan 5 11:19:51 GMT 2012 Rank 25 Aligned Residues 38 % Identity 26% Template c3eweD_ PDB info PDB header:protein transport,structural protein Chain: D: PDB Molecule:nucleoporin nup85; PDBTitle: crystal structure of the nup85/seh1 complex Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.																.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	I	C	E	M	Y	S	R	V	S	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	W	C	R	N	V	L	S	P	S	K	L	R	E	K	W	D	E	L	S	L	R	L	S	P	S
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																																		.	.
Template Sequence		E	F	I	E	S	L	L	N	W	I	N	R	S	D	G	E	P	D	E	E	Y	I	E	Q	V	E	T	Q	Y	F	W	K	.	.	L	L	N	Q	L	V	L	R	G	L	L	S	Q	A	I	G	C	I	E	R	S
Template Known Secondary structure													T	T	T									T										.	.								T	T										T	T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions