Job Description P32140 Confidence 100.00% Date Thu Jan 5 11:49:26 GMT 2012 Rank 1 Aligned Residues 407 % Identity 89% Template d2afaa1 SCOP info alpha/alpha toroid Six-hairpin glycosidases N-acylglucosamine (NAG) epimerase Resolution 2.15

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	F	N	T	L	S	H	N	R	W	L	E	Q	E	T	D	R	I	F	D	F	G	K	N	S	V	V	P	T	G	F	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	F	N	T	L	S	H	N	R	W	L	E	Q	E	T	D	R	I	F	N	F	G	K	N	A	V	V	P	T	G	F	G	W	L	G	N	K	G	Q	I	K	E	E	X	G	T	H	L	W	I	T	A	R	X	L	H	V	Y	S	V	A	A	S	X	G	R	P	G	A	Y	D	L	V	D	H	G	I	K	A
Template Known Secondary structure				T	T																				G	G	G			T	T					B		T	T	S		B		G	G	G																				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	Q	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	V	I	E	K	Y	F	W	S	E	E	E	Q	X	C	L	E	S	W	D	E	A
Template Known Secondary structure		T	T	T	T	T	B		T	T	T	S	S	B		S				S	S	S																							T	T	T		T	T																T			T	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	Q	T	E	D	Y	R	G	G	N	A	N	X	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	L	R	I	A	S	V	I	I	H	D	V	A	R	N	G	D	Y	R	V	N	E	H	F	D	S	Q	W	N	P	I	R	D	Y	N	K	D	N	P	A	H	R	F	R	A
Template Known Secondary structure		S			B		S																				T	T			T																			G	G	G	T	T								T	T			B		T	T	T	T	T	T		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	G	T	P	G	H	W	I	E	W	G	R	L	X	L	H	L	H	A	A	L	E	A	R	F	E	T	P	P	A	W	L	L	E	D	A	K	G	L	F	H	A	T	I	R	D	A	W	A	P	D	G	A	D	G	F	V	Y	S	V	D	W	D	G	K	P	I	V	R	E	R	V	R	W	P	I	V	E	A
Template Known Secondary structure		S	S	B																					T	T	T																							B	S		S	S	S	S	S	B		S		B		T	T	S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	T	A	Y	A	L	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L	M	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	T	T	K	V	W	D	G	K	Q	D	I	Y	H	L	L	H	C	L	V	I	P	R	I	P	L	A	P	G	M	A	P
Query Conservation
Alig confidence																																																			.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		X	G	T	A	Y	A	L	Y	T	L	T	D	D	S	Q	Y	E	E	W	Y	Q	K	W	W	D	Y	C	I	K	Y	L	X	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	.	.	.	.	T	T	G	K	Q	D	I	Y	H	L	L	H	C	L	V	I	P	R	L	P	L	A	P	G	L	A	P
Template Known Secondary structure																																T	B		T	T	T	S	S	B		S				T	T	S		B	.	.	.	.								T	T	T					T	G	G	G	S		S	S	S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		402	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	A	G	L	L	D	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	A	G	L	L	D	I	N	A
Template Known Secondary structure					T	T		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions