Job Description P32140 Confidence 38.00% Date Thu Jan 5 11:49:26 GMT 2012 Rank 67 Aligned Residues 216 % Identity 16% Template d1r76a_ SCOP info alpha/alpha toroid Family 10 polysaccharide lyase Family 10 polysaccharide lyase Resolution 2.65

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		K	A	A	R	H	V	A	D	V	I	V	S	.	F	Q	T	P	A	G	G	W	G	K	N	Q	P	R	D	G	A	L	R	L	P	G	Q	H	Y	T	G	E	N	V	A	K	V	K	R	D	R	D	W	H	Y	V	G	T	I	D	N	D	A	T	V	T	E	I	R	F	L	A	Q	V	V	S	Q	L	A	P	E
Template Known Secondary structure														.				T	T	S				S	S			S	S	S					T	T			S	S														S	S	S	S	B		G	G	G	T	T														S		G	G
Template Predicted Secondary structure														.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.
Predicted Secondary structure																																															.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	.	.	.	.	.	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	.	.	.	.	.	.	.	.	.	K	K
Query Conservation																																															.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																									.			.	.	.	.	.															.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																									.			.	.	.	.	.
Template Sequence		E	A	A	P	Y	R	D	A	A	L	K	G	I	E	Y	L	L	A	S	Q	F	P	N	.	G	G	.	.	.	.	.	W	P	Q	V	W	P	L	E	G	G	Y	H	D	A	I	T	Y	N	D	D	A	L	V	H	V	A	E	L	L	S	D	I	A	A	G	R	D	G	F	G	F	V	P	P	A	I	R	T	R
Template Known Secondary structure		G																			S		T	T	.	S		.	.	.	.	.		B	S	B	S	S				G	G	G	G	S				G	G	G															T		T	T		T	T	S
Template Predicted Secondary structure																									.			.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.										.
Query SS confidence																							.	.	.	.										.
Query Sequence		W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	.	.	.	.	Y	R	V	N	E	H	F	D	T	.	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C
Query Conservation																							.	.	.	.										.
Alig confidence																							.	.	.	.			.	.						.															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																													.	.																					.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	A	T	N	A	A	I	H	C	I	V	E	T	Q	V	V	Q	D	G	K	R	L	G	W	G	.	.	Q	Q	H	D	A	L	T	L	R	P	T	S	A	R	N	F	E	P	A	A	.	.	.	.	.	.	.	L	S	S	T	E	S	A	R	I	L	L	F	L	M	E	I	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S				T	T							.	.	S				T	T	T		S	B				S	T	T			S		.	.	.	.	.	.	.														T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.																					.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.								.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	.	.	.	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R
Query Conservation																															.	.	.
Alig confidence																															.	.	.								.
Template Conservation																																									.
Template Sequence		E	A	P	S	D	A	V	K	Q	A	I	R	G	G	V	A	W	L	N	T	S	V	I	R	D	Q	G	A	K	P	L	W	S	R	F	Y	S	L	D	.	G	N	K	P	V	F	G	D	R
Template Known Secondary structure		S	S																			S							S	S					S				S	S	.	S			B					T
Template Predicted Secondary structure																																									.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions