Job Description P32140 Confidence 97.75% Date Thu Jan 5 11:49:26 GMT 2012 Rank 20 Aligned Residues 276 % Identity 12% Template d1nxca_ SCOP info alpha/alpha toroid Seven-hairpin glycosidases Class I alpha-1;2-mannosidase, catalytic domain Resolution 1.51

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.
Predicted Secondary structure														.																																																				.	.	.	.	.	.	.									.
Query SS confidence														.																																																				.	.	.	.	.	.	.									.
Query Sequence		R	M	L	H	V	Y	S	V	A	A	A	M	.	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	.	.	.	.	.	.	.	L	G	A	A	S	A	V	T	.
Query Conservation														.																																																				.	.	.	.	.	.	.									.
Alig confidence														.																																																				.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		R	F	V	G	G	L	L	S	A	Y	Y	L	S	G	E	E	I	F	R	K	K	A	V	E	L	G	V	K	L	L	P	A	F	H	T	P	S	G	I	P	W	A	L	L	N	M	K	S	G	I	G	R	N	W	P	W	A	S	G	G	S	S	I	L	A	E	F	G	T	L	H	L	E	F	M	H	L	S	H	L
Template Known Secondary structure																															G	G	G	G		S	S	S	S				S				T	T	T							T	T	S	G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																							.															.														.	.
Query SS confidence																																							.															.														.	.
Query Sequence		T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	.	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	.	A	V	E	A	F	L	I	V	Y	D	V	T	H	.	.	D	K	K	W	L	D	R	A	I	R	V	A
Query Conservation																																							.															.														.	.
Alig confidence																							.	.															.															.														.	.
Template Conservation																							.	.
Template Sequence		S	G	D	P	V	F	A	E	K	V	M	K	I	R	T	V	L	N	K	L	D	.	.	K	P	E	G	L	Y	P	N	Y	L	N	P	S	S	G	Q	W	G	Q	H	H	V	S	V	G	G	L	G	D	S	F	Y	E	Y	L	L	K	A	W	L	M	S	D	K	T	D	L	E	A	K	K	M	Y	F	D	A	V
Template Known Secondary structure					T																S		.	.		G	G	G				S				T	T	T			B		S					S	S	T	T	T														T	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	I	E	T	H	L	I	R	K	S	S	G	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	A	E	W	K	G	G	L	L	E	H	K	M	G	H	L	T	C	F	A	G	G	M	F	A	L	G	A	D	G	A	P	E	A	R	A	Q	H	Y	L	E	L	G	A	E	I
Template Known Secondary structure								T					T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T								T	G	G	G	G								T	S	T	T	S		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.																		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		282	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure									.	.	.	.	.	.																																.
Query SS confidence									.	.	.	.	.	.																																.
Query Sequence		F	N	A	T	V	R	D	.	.	.	.	.	.	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	.	E	A	M	G	T	A	Y	A	L	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L
Query Conservation									.	.	.	.	.	.																																.
Alig confidence									.	.	.	.	.	.							.	.	.																							.
Template Conservation																					.	.	.
Template Sequence		A	R	T	C	H	E	S	Y	N	R	T	Y	V	K	L	G	P	E	A	.	.	.	F	R	F	D	G	G	V	E	A	I	A	T	R	Q	N	E	K	Y	Y	I	L	R	P	E	V	I	E	T	Y	M	Y	M	W	R	L	T	H	D	P	K	Y	R	T	W	A	W	E	A	V	E	A	L	E	S	H	C
Template Known Secondary structure											T	S	S	S	S	S			S		.	.	.			S	S	T	T		S	S	B			S	G	G	G			B		S																																			T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions