Job Description P32140 Confidence 98.54% Date Thu Jan 5 11:49:26 GMT 2012 Rank 10 Aligned Residues 318 % Identity 10% Template d1nc5a_ SCOP info alpha/alpha toroid Six-hairpin glycosidases Hypothetical protein YteR Resolution 1.60

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	.	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L
Query Conservation																													.
Alig confidence																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	E	E	L	P	P	A	N	R	W	H	Y	H	Q	G	V	F	L	C	G	V	L	R	L	W	E	A	T	G	E	K	R	Y	F	E	Y	A	K	A	Y	A	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	D	N	G	N	L	L	F	R	R	D	E	L	D	A	I	Q	A	G
Template Known Secondary structure			T	T	T	S	S	S	T	T																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T			B				T	T		G	G	G	T	G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		118	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	G	A	A	S	A	V	T	T	.	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R
Query Conservation											.
Alig confidence											.																																									.	.	.	.	.					.
Template Conservation																																																				.	.	.	.	.					.
Template Sequence		L	I	L	F	P	L	Y	E	Q	T	K	D	E	R	Y	V	K	A	A	K	R	L	R	S	L	Y	G	T	L	N	R	T	S	E	G	G	F	W	H	K	D	G	Y	P	Y	Q	M	W	L	D	.	.	.	.	.	G	L	Y	M	.	G	G	P	F	A	L	K	Y	A	N	L	K	Q	E	T	E	L	F	D	Q
Template Known Secondary structure		G	G																						G	G	G	G	T	S		B		T	T	S		B		S		T	T	S	T	T				T		.	.	.	.	.					.													T		T
Template Predicted Secondary structure																																																				.	.	.	.	.					.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	.	.	R	C	E	Q	P	P	A	W	L
Query Conservation																																																																							.	.
Alig confidence																																																	.		.	.	.	.	.	.	.														.	.
Template Conservation																																																	.		.	.	.	.	.	.	.
Template Sequence		V	V	L	Q	E	S	L	M	R	K	H	T	K	D	A	K	T	G	L	F	Y	H	A	W	D	E	A	K	K	M	P	W	A	N	E	E	T	G	C	S	P	E	F	W	A	R	S	.	I	.	.	.	.	.	.	.	G	W	Y	V	M	S	L	A	D	M	I	E	E	L	P	K	K	H	P	N	R	H	V	W
Template Known Secondary structure														B		T	T	T	S		B		S				T	T			S	T	T	S		T	T	T		B		S			B				.		.	.	.	.	.	.	.											G	G	G	S		T	T
Template Predicted Secondary structure																																																	.		.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	E	A	M	G	T	A	Y	A	L	Y	T	V	T	.	.	.	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y
Query Conservation																																																												.	.	.
Alig confidence																.					.											.	.	.																										.	.	.
Template Conservation																.					.											.	.	.
Template Sequence		K	N	T	L	Q	D	M	I	K	S	I	C	R	Y	.	Q	D	K	E	.	T	G	L	W	Y	Q	I	V	D	K	.	.	.	G	D	R	S	D	N	W	L	E	S	S	G	S	C	L	Y	M	Y	A	I	A	K	G	I	N	K	G	Y	L	D	R	A	Y	E	T	T	L	L	K	A	Y	Q	G	L	I	Q	H
Template Known Secondary structure														T	T	.	S		T	T	.	T	S			B	S	B	T	T		.	.	.	T	T	S	T	T			B																			T	S	S		G	G	G
Template Predicted Secondary structure																.					.											.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.		.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		L	M	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	T	.	.	.	.	.	.	.	T	K	V	W	D	G	K	Q	D	I	Y	H	L	L	H	C	L	V	I
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	E	T	S	E	D	G	A	F	L	V	K	D	I	C	V	G	T	S	A	G	F	Y	D	Y	Y	V	S	R	E	R	S	T	N	D	L	H	G	A	G	A	F	I	L	A
Template Known Secondary structure							T	T	S										S			S								T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions