Job Description P32140 Confidence 35.73% Date Thu Jan 5 11:49:26 GMT 2012 Rank 68 Aligned Residues 162 % Identity 10% Template d1gxma_ SCOP info alpha/alpha toroid Family 10 polysaccharide lyase Family 10 polysaccharide lyase Resolution 1.32

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																						.	.	.	.	.	.																												.
Query SS confidence																						.	.	.	.	.	.																												.
Query Sequence		K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	.	.	.	.	.	.	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	.	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q
Query Conservation																						.	.	.	.	.	.																												.
Alig confidence										.												.	.	.	.	.	.																												.																						.
Template Conservation										.																																																																			.
Template Sequence		D	V	V	L	S	Y	Q	Q	.	N	N	G	G	W	P	K	N	L	D	Y	N	S	V	G	N	G	G	G	G	N	E	S	G	T	I	D	N	G	A	T	I	T	E	M	V	F	L	A	E	V	Y	K	S	G	G	N	T	K	Y	R	D	A	V	R	K	A	A	N	F	L	V	N	S	Q	Y	.	S	T	G	A
Template Known Secondary structure							T			.	T	T	S				S				T	T	T									S					G	G	G	T	T																																				.	T	T	S
Template Predicted Secondary structure										.																																																																			.
Template SS confidence
		355	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	.	.	.	.	.	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	.	.	.	.	.	.	.	.	.	.	.	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	.	.	.
Query Conservation																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	P	Q	F	Y	P	L	K	G	G	Y	S	D	H	A	T	F	N	D	N	G	M	A	Y	A	L	T	V	L	D	F	A	A	N	K	R	A	P	F	D	T	D	V	F	S	D	N	D	R	T	R	F	K	T	A	V	T	K	G	T	D	Y	I	L	K	A	Q	W	K	Q	N	G	V	L	T
Template Known Secondary structure		.	.	.	.	.		B	S			S			S	G	G	G	G	S				G	G	G														T	T		T	T	S		S	T	T	S																							S				T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
			214	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.										.
Query SS confidence		.										.
Query Sequence		.	Y	R	V	N	E	H	F	D	T	.	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L
Query Conservation		.										.
Alig confidence		.					.	.				.															.	.	.	.	.	.	.
Template Conservation							.	.																			.	.	.	.	.	.	.
Template Sequence		V	W	C	A	Q	.	.	H	G	A	L	D	Y	Q	P	K	K	A	R	A	Y	E	L	E	S	.	.	.	.	.	.	.	L	S	G	S	E	S	V	G	V	L	A	F	L	M
Template Known Secondary structure					S		.	.			T	T	T			B				S	T	T			S	S	.	.	.	.	.	.	.			T	T	T									T
Template Predicted Secondary structure							.	.																			.	.	.	.	.	.	.
Template SS confidence
		508	.	510	.	.			.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530								.	.	.	.	.	.	.	.	.	540	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions