Phyre 2 alignment of P32140 with d1clca1

Job Description P32140
Confidence 97.37% Date Thu Jan 5 11:49:26 GMT 2012

Rank 27 Aligned Residues 258

% Identity 10% Template d1clca1

SCOP info alpha/alpha toroid Six-hairpin glycosidases Cellulases catalytic domain

Resolution 1.90

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.																	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query SS confidence																						.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query Sequence	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	.	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	.	.	.	.	.	.	.	.	.
Query Conservation																						.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Alig confidence																						.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	Y	N	K	Y	V	V	N	A	G	I	T	V	G	S	M	F	L	A	W	E	H	F	K	D	Q	L	E	P	V	A	L	E	I	P	E	K	N	N	S	I	P	D	F	L	D	E	L	K	Y	E	I	D	W	I	L	T	M	Q	Y	P	D	G	S	G	R	V	A	H	K	V	S	T	R	N	F	G	G	F	I
Template Known Secondary structure	S																						S					T	T				S	S	G	G	G	G	S	S	S																T	T	B		T	T	S	S			B							S	S				S
Template Predicted Secondary structure
Template SS confidence
	201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

					99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure	.	.	.	.
Query SS confidence	.	.	.	.
Query Sequence	.	.	.	.	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N
Query Conservation	.	.	.	.
Alig confidence	.	.	.	.
Template Conservation
Template Sequence	M	P	E	N	E	H	D	E	R	F	F	V	P	W	S	S	A	A	T	A	D	F	V	A	M	T	A	M	A	A	R	I	F	R	P	Y	D	P	Q	Y	A	E	K	C	I	N	A	A	K	V	S	Y	E	F	L	K	N	N	P	A	N	V	F	A	N	Q	S	G	F	S	T	G	E	Y	A	T	V	S	D	A
Template Known Secondary structure		G	G	G			S																											T	T	T																								S							T	T			S						S		S
Template Predicted Secondary structure
Template SS confidence
	281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	D	D	R	L	W	A	A	A	E	M	W	E	T	L	G	D	E	E	Y	L	R	D	F	E	N	R	A	A	Q	F	S	K	K	I	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	W	D	N	V	A	N	L	G	M
Template Known Secondary structure																													T		S	S	S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																																	.	.	400	.	.	.	.	.	.	.	.

	255	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																	.	.	.
Query SS confidence														.	.	.																																																	.	.	.
Query Sequence	L	M	L	H	I	H	A	A	L	E	A	R	C	.	.	.	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	.	.	.	W	P	I	V	E	A	M	G	T	A	Y	A	L
Query Conservation														.	.	.																																																	.	.	.
Alig confidence														.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	F	T	Y	L	L	S	E	R	P	G	K	N	P	A	L	V	Q	S	I	K	D	S	L	L	S	T	A	D	S	I	V	R	T	S	Q	N	H	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	T	L	G	T	T	Y	Y	W	G	C	N	G	T	V	V	R	Q	T	M	I	L	Q	V	A
Template Known Secondary structure									S																											T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T				T	T								T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.																.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

	329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence	N	K	I	S	P	N	N	D	Y	V	N	A	A	L	D	A	I	S	H	V	F
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
	474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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