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Job DescriptionP32140
Confidence97.94%DateThu Jan 5 11:49:26 GMT 2012
Rank16Aligned Residues256
% Identity13%Templatec3k11A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative glycosyl hydrolase; PDBTitle: crystal structure of putative glycosyl hydrolase (np_813087.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YQHFFALLGAASAVTT. GHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGN. . ANMHAVEAFLIVYDV
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Template Sequence  YEWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVA. PHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAXIKLRLK
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SGGGT
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   102.......110.........120.........130........ .140.........150.........160.........170.........180
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  THDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHIHAALEARC
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Template Sequence  DESLPVDGLIQNYFDFIINKEYRLADGTFA. . . . . . . . . . . . . . . . . . . . . . RNRPQRNTLWLDDXFXGIPAVAQXSRYD
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   181........190.........200.........210 .........220.........230........
 
   268.270.........280.........290.........300.........310..... ....320........ .330.........340.
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Query Sequence  EQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVR. . . . . WPIVEAMGTAYAL. YTVTGDRQYETWY
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Template Sequence  KEAKNKYLAEAVKQFLQFADRXFIPEK. . GLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVXDYF
Template Known Secondary structure  GGGTTT..T
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   239240.........250.........260..... ....270.........280.........290.........300.........310......
 
   342.......350.........360.........370.........380.........390.........400.........
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Query Sequence  QTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLD
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Template Sequence  RAHVRGVTALQS. . GEGFWHQLLDC. . . . . . . . . NDSY. LETSATAIYV. . . . . . YCLAHAINKGWID
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   317..320........ .330......... 340... ......350... ......360......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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